RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
CD9-210ENST00000543916 OR8B2Q96RD0 313 aa12.58□□□□□ -0.4
CD9-210ENST00000543916 CCL13Q99616 98 aa12.58□□□□□ -0.4
CD9-210ENST00000543916 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
CD9-210ENST00000543916 HES4Q9HCC6 221 aa12.58□□□□□ -0.4
CD9-210ENST00000543916 NLKQ9UBE8 527 aa12.58□□□□□ -0.4
CD9-210ENST00000543916 DUX4Q9UBX2 424 aa12.58□□□□□ -0.4
CD9-210ENST00000543916 LRCH1Q9Y2L9 728 aa12.58□□□□□ -0.4
CD9-210ENST00000543916 MAGEA13PA6NCF6 341 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 OR2AT4A6NND4 320 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 A8MXK9 166 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 PHF1O43189 567 aaPredicted RBP12.57□□□□□ -0.4
CD9-210ENST00000543916 NDUFA2O43678 99 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 ANGPTL7O43827 346 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 GPX5O75715 221 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 SC5DO75845 299 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 NXPH2O95156 264 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 PITPNBP48739 271 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 DVL1P1P54792 670 aaPredicted RBP12.57□□□□□ -0.4
CD9-210ENST00000543916 ZP1P60852 638 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 PDZK1IP1Q13113 114 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 KISS1Q15726 138 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 SSX1Q16384 188 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 ACSM3Q53FZ2 586 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 ARMCX4Q5H9R4 360 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 FAM27D1Q5T7N8 215 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 OR52N4Q8NGI2 321 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 ANGPTL6Q8NI99 470 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 TMEM203Q969S6 136 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 CEP19Q96LK0 163 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 NEK6Q9HC98 313 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 SMURF1Q9HCE7 757 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 NOX4Q9NPH5 578 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
CD9-210ENST00000543916 SF3B6Q9Y3B4 125 aaKnown RBP12.57□□□□□ -0.4
CD9-210ENST00000543916 MALRD1Q5VYJ5 2156 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 IGKV1D-17A0A075B6S4 117 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 A8MV72 311 aaPredicted RBP12.56□□□□□ -0.4
CD9-210ENST00000543916 GABRPO00591 440 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 PSG2P11465 335 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 CPT2P23786 658 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 MAPK3P27361 379 aaPredicted RBP12.56□□□□□ -0.4
CD9-210ENST00000543916 BDKRB2P30411 391 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 TGFBR2P37173 567 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 NPBWR2P48146 333 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 GP2P55259 537 aaKnown RBP12.56□□□□□ -0.4
CD9-210ENST00000543916 GNB2P62879 340 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 PPP3R1P63098 170 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 SMIM21Q3B7S5 101 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 NLRC3Q7RTR2 1065 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 GLCCI1Q86VQ1 547 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 MKXQ8IYA7 352 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 FAM216BQ8N7L0 139 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 THRSPQ92748 146 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 TMEM186Q96B77 213 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 GAFA1Q96PS6 74 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 SSBP3Q9BWW4 388 aaPredicted RBP12.56□□□□□ -0.4
CD9-210ENST00000543916 TMEM138Q9NPI0 162 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 KAAG1Q9UBP8 84 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 CKLFQ9UBR5 152 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 ZNF222Q9UK12 451 aa12.56□□□□□ -0.4
CD9-210ENST00000543916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.56□□□□□ -0.4
CD9-210ENST00000543916 NSD1Q96L73 2696 aaPredicted RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 ABCA1O95477 2261 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 TRAV20A0A0B4J274 112 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 INAFM1C9JVW0 142 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 TMPRSS2O15393 492 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 MAGEB3O15480 346 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 FOXH1O75593 365 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 ALDOBP05062 364 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 SELLP14151 372 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 BCL3P20749 454 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 CEBPDP49716 269 aaPredicted RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 ATPAF1Q5TC12 328 aaPredicted RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 DDI2Q5TDH0 399 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 WDR25Q64LD2 544 aaPredicted RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 TMEM91Q6ZNR0 172 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 ZNF788Q6ZQV5 615 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 CEACAM19Q7Z692 300 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 SATL1Q86VE3 508 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 FCGR1BQ92637 280 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 PPIL3Q9H2H8 161 aaKnown RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 RBFOX1Q9NWB1 397 aaKnown RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 IL36RNQ9UBH0 155 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 CLN8Q9UBY8 286 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 KCNS2Q9ULS6 477 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 FOXJ3Q9UPW0 622 aa12.55□□□□□ -0.4
CD9-210ENST00000543916 POLR3KQ9Y2Y1 108 aaPredicted RBP12.55□□□□□ -0.4
CD9-210ENST00000543916 ARHGAP32A7KAX9 2087 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 NKX6-3A6NJ46 265 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 RFPL4AA6NLU0 287 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 RFPL4AL1F8VTS6 287 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 TRAPPC2LH3BP13 241 aa12.54□□□□□ -0.4
CD9-210ENST00000543916 DVL1O14640 695 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms