RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 CLVS2Q5SYC1 327 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 FOXB2Q5VYV0 432 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 WFDC9Q8NEX5 89 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 OR11H6Q8NGC7 330 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 ASB17Q8WXJ9 295 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 TEX12Q9BXU0 123 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 HES4Q9HCC6 221 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 GPR173Q9NS66 373 aa18.22■□□□□ 0.51
CDKN3-207ENST00000543789 PQLC2LA1A4F0 135 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 K7N7A8 449 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 DLGAP1O14490 977 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 GNGT2O14610 69 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 RBP4P02753 201 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 ZNF728P0DKX0 622 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 ESRRGP62508 458 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 BLCAPP62952 87 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 LDLRAD2Q5SZI1 272 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 ZNF626Q68DY1 528 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 TMEM42Q69YG0 159 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 Q6ZS46 218 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 ASRGL1Q7L266 308 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 TMEM179BQ7Z7N9 219 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 BATF2Q8N1L9 274 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 LRGUKQ96M69 825 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 TMEM14AQ9Y6G1 99 aa18.21■□□□□ 0.51
CDKN3-207ENST00000543789 PRR32B1ATL7 298 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 TTRP02766 147 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 ALDOBP05062 364 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 MRPL3P09001 348 aaKnown RBP18.2■□□□□ 0.5
CDKN3-207ENST00000543789 CD33P20138 364 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 VDAC2P45880 294 aaPredicted RBP18.2■□□□□ 0.5
CDKN3-207ENST00000543789 DYNLT3P51808 116 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 OR12D2P58182 307 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 COL10A1Q03692 680 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 DYNC1I2Q13409 638 aaKnown RBP18.2■□□□□ 0.5
CDKN3-207ENST00000543789 TMEM236Q5W0B7 351 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 PIGWQ7Z7B1 504 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 IKZF2Q9UKS7 526 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 SLC22A13Q9Y226 551 aa18.2■□□□□ 0.5
CDKN3-207ENST00000543789 CHRM2P08172 466 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 IGHV1-8P0DP01 117 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 IGLL1P15814 213 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 MPZP25189 248 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 ERVK11-1P61568 191 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 MFGE8Q08431 387 aaPredicted RBP18.19■□□□□ 0.5
CDKN3-207ENST00000543789 SNAPC1Q16533 368 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 ASCC1Q8N9N2 400 aaKnown RBP18.19■□□□□ 0.5
CDKN3-207ENST00000543789 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDKN3-207ENST00000543789 GTF2A1LQ9UNN4 478 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 COPS3Q9UNS2 423 aa18.19■□□□□ 0.5
CDKN3-207ENST00000543789 MEX3AA1L020 520 aaKnown RBP18.18■□□□□ 0.5
CDKN3-207ENST00000543789 H3BUI4 141 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 F2RL2O00254 374 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 MPIG6BO95866 241 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 EDDM3BP56851 147 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 CD83Q01151 205 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 VAX1Q5SQQ9 334 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 GDPD3Q7L5L3 318 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 ANGPTL5Q86XS5 388 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 OR5AU1Q8NGC0 362 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 NSL1Q96IY1 281 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 OCSTAMPQ9BR26 566 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 TTTY10Q9BZA0 68 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 TVP23BQ9NYZ1 205 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 HILPDAQ9Y5L2 63 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 V9GYS6 101 aa18.18■□□□□ 0.5
CDKN3-207ENST00000543789 A0A1W2PRX2 142 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 CCDC182A6NF36 153 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 A6NIN4 97 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 LOC110117498-PIK3R3F6TDL0 507 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 ZNF737O75373 536 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 E2F6O75461 281 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 PRKACGP22612 351 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 SLC34A1Q06495 639 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 MINOS1Q5TGZ0 78 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 ADGRG5Q8IZF4 528 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 HS3ST5Q8IZT8 346 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 OR14K1Q8NGZ2 314 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 ASB9Q96DX5 294 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 PKIBQ9C010 78 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 SLC25A19Q9HC21 320 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 DNAJB9Q9UBS3 223 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 MINOS1-NBL1R4GNA1 71 aa18.17■□□□□ 0.5
CDKN3-207ENST00000543789 SRSF10O75494 262 aaKnown RBP18.16■□□□□ 0.5
CDKN3-207ENST00000543789 ANXA8P13928 327 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 ACTR3P61158 418 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 MEF2CQ06413 473 aaPredicted RBP18.16■□□□□ 0.5
CDKN3-207ENST00000543789 IL24Q13007 206 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 TMEM95Q3KNT9 176 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 BCL2L15Q5TBC7 163 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 ELMOD2Q8IZ81 293 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 ZNF714Q96N38 554 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 APOL4Q9BPW4 351 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 MOB1AQ9H8S9 216 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 OR52A1Q9UKL2 312 aa18.16■□□□□ 0.5
CDKN3-207ENST00000543789 A0A1B0GTI1 187 aa18.15■□□□□ 0.5
CDKN3-207ENST00000543789 PF4V1P10720 104 aa18.15■□□□□ 0.5
CDKN3-207ENST00000543789 JUNBP17275 347 aaPredicted RBP18.15■□□□□ 0.5
CDKN3-207ENST00000543789 AZGP1P25311 298 aaKnown RBP18.15■□□□□ 0.5
CDKN3-207ENST00000543789 ACTA2P62736 377 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms