RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 OR8G5Q8NG78 346 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF799Q96GE5 643 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 POM121Q96HA1 1249 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 CLCC1Q96S66 551 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF251Q9BRH9 671 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 TP53I11O14683 189 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 RAMP1O60894 148 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 S100A6P06703 90 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 TMEM225BP0DP42 221 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 DUSP1P28562 367 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 MAS1LP35410 378 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 PPT1P50897 306 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 PIGPP57054 158 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 SHBQ15464 509 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 OR8B8Q15620 311 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 EIF2S3LQ2VIR3 472 aaKnown RBP11.98□□□□□ -0.49
VPS33A-208ENST00000543633 MIDNQ504T8 468 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 LIAT1Q6ZQX7 453 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 GALNTL5Q7Z4T8 443 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ZFP82Q8N141 532 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 OR1J1Q8NGS3 322 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 NPRL2Q8WTW4 380 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ERGIC1Q969X5 290 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 CLDN23Q96B33 292 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 NTNG2Q96CW9 530 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 C18orf12Q96KH6 178 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 CRB3Q9BUF7 120 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 RPS10P5Q9NQ39 176 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
VPS33A-208ENST00000543633 ARID1BQ8NFD5 2236 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-208ENST00000543633 C7orf77A4D0Y5 90 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 AGPAT2O15120 278 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 DHHO43323 396 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 OR2J2O76002 312 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 GABRR1P24046 479 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 CHATP28329 748 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 SFTPDP35247 375 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 ABCA11PQ4W5N1 156 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 TMEM123Q8N131 208 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 LGI3Q8N145 548 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 PIGTQ969N2 578 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 CYYR1Q96J86 154 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 SYT3Q9BQG1 590 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 NAA11Q9BSU3 229 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-208ENST00000543633 SEBOXQ9HB31 216 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-208ENST00000543633 ELL3Q9HB65 397 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-208ENST00000543633 C19orf12Q9NSK7 152 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 IL36GQ9NZH8 169 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 CEP192Q8TEP8 1941 aa11.97□□□□□ -0.49
VPS33A-208ENST00000543633 C5orf63A6NC05 138 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 F5H5K5 113 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.49
VPS33A-208ENST00000543633 CAMLGP49069 296 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 SNRPEP62304 92 aaKnown RBP11.96□□□□□ -0.49
VPS33A-208ENST00000543633 SRPXP78539 464 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 MRPS34P82930 218 aaKnown RBP11.96□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.49
VPS33A-208ENST00000543633 LHFPL2Q6ZUX7 228 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 UBALD2Q8IYN6 164 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 WDSUB1Q8N9V3 476 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 CCDC71LQ8N9Z2 235 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 RTN4IP1Q8WWV3 396 aaPredicted RBP11.96□□□□□ -0.49
VPS33A-208ENST00000543633 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 RASL10BQ96S79 203 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
VPS33A-208ENST00000543633 OR5H15A6NDH6 313 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 MSTNO14793 375 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 ZNF44P15621 663 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 PNLIPP16233 465 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 CRYGSP22914 178 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 FOXL2P58012 376 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 RAB35Q15286 201 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 RSU1Q15404 277 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 RSPO1Q2MKA7 263 aaPredicted RBP11.96□□□□□ -0.5
VPS33A-208ENST00000543633 LURAP1LQ8IV03 231 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 HPSE2Q8WWQ2 592 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 TCEAL3Q969E4 200 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 FOXD3Q9UJU5 478 aaPredicted RBP11.96□□□□□ -0.5
VPS33A-208ENST00000543633 LHX6Q9UPM6 363 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.5
VPS33A-208ENST00000543633 USP34Q70CQ2 3546 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 MASP2O00187 686 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 ST8SIA3O43173 380 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 SCGB1D2O95969 90 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 OR5AC1P0C628 307 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 ID4P47928 161 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 MTCP1P56278 107 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 C1QL4Q86Z23 238 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 MAML2Q8IZL2 1156 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-208ENST00000543633 FAM185AQ8N0U4 392 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 MOB3AQ96BX8 217 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 SPSB2Q99619 263 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 MESP1Q9BRJ9 268 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 DEFB126Q9BYW3 111 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 SMIM3Q9BZL3 60 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 SLC35B3Q9H1N7 401 aa11.95□□□□□ -0.5
VPS33A-208ENST00000543633 ZNF286AQ9HBT8 521 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms