RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ARRDC5A6NEK1 342 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 OR6C6A6NF89 314 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 H3BN98 237 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 CD5LO43866 347 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 IGHV3-13P01766 116 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 HMGN1P05114 100 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 KRT8P05787 483 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ANXA8P13928 327 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ACHEP22303 614 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ALDH3B1P43353 468 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 RAD23AP54725 363 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 TMEM33P57088 247 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 FXYD6P3P58550 94 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 DEFA1P59665 94 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 DEFA3P59666 94 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 PPP1CBP62140 327 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 MRPS11P82912 194 aaKnown RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 SLC3A1Q07837 685 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ENDOGQ14249 297 aaKnown RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 GGTLC2Q14390 218 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ZNF181Q2M3W8 571 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 CLEC12AQ5QGZ9 265 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ELFN2Q5R3F8 820 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 RBM48Q5RL73 367 aaKnown RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 LPCAT4Q643R3 524 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 Q71RC1 249 aaPredicted RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 LRP11Q86VZ4 500 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 OR6V1Q8N148 313 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 PAPD5Q8NDF8 572 aaKnown RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 PROKR2Q8NFJ6 384 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 OR9Q2Q8NGE9 314 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 OR1F12Q8NHA8 337 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 SLC25A40Q8TBP6 338 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 TEX47Q8TBZ9 253 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 CANT1Q8WVQ1 401 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 PHF21AQ96BD5 680 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 LYZL4Q96KX0 146 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 FOXN4Q96NZ1 517 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 MS4A10Q96PG2 267 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 DUX5Q96PT3 197 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 COQ7Q99807 217 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 TSSK6Q9BXA6 273 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 EGLN1Q9GZT9 426 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 RACGAP1Q9H0H5 632 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 HDHD2Q9H0R4 259 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 PPIL3Q9H2H8 161 aaKnown RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 EGLN3Q9H6Z9 239 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 RPRD1BQ9NQG5 326 aaKnown RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 YAE1D1Q9NRH1 226 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 PDP1Q9P0J1 537 aaPredicted RBP4.53□□□□□ -1.68
CPSF7-220ENST00000541963 DNAJB9Q9UBS3 223 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 ATPIF1Q9UII2 106 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 DAPK2Q9UIK4 370 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 FZR1Q9UM11 496 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 GRIP1Q9Y3R0 1128 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 TACC2O95359 2948 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 USF3Q68DE3 2245 aa4.53□□□□□ -1.68
CPSF7-220ENST00000541963 OTOGQ6ZRI0 2925 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 IGLV1-36A0A0B4J1U3 117 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 TCRBV3S1A0A5B6 114 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 RIIAD1A6NNX1 92 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 H3BMQ9 156 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 BHLHE40O14503 412 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SURF4O15260 269 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 TIMM8AO60220 97 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 LY6HO94772 140 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 MPZL1O95297 269 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 APOA1P02647 267 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 FAM106CPP0CH98 169 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 MYOD1P15172 320 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SELEP16581 610 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF3P17036 446 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PCMT1P22061 227 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PAICSP22234 425 aaKnown RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 EEF1B2P24534 225 aaKnown RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 GIFP27352 417 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 FMO3P31513 532 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 CRYBB2P43320 205 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 GPR6P46095 362 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SLC25A1P53007 311 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PPP5CP53041 499 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 LINC00205P59089 165 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ISL1P61371 349 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PPP1R8Q12972 351 aaKnown RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 MAD2L1BPQ15013 274 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 TAF13Q15543 124 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 DGUOKQ16854 277 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 LRRC36Q1X8D7 754 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM249Q2WGJ8 235 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 HFEQ30201 348 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ALKBH6Q3KRA9 238 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF770Q6IQ21 691 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SLC27A4Q6P1M0 643 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF773Q6PK81 442 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PLEKHG7Q6ZR37 379 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ZBTB49Q6ZSB9 765 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 C1orf87Q8N0U7 546 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ZCCHC24Q8N2G6 241 aaKnown RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PARP8Q8N3A8 854 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms