RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 UNC119Q13432 240 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 MS4A18Q3C1V0 323 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 RNF212Q495C1 297 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 DNM1P34Q6PK57 102 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 PLXDC2Q6UX71 529 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 PAQR4Q8N4S7 273 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 THRSPQ92748 146 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 RGCCQ9H4X1 137 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 CYTL1Q9NRR1 136 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 LPAR3Q9UBY5 353 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 WIPF3A6NGB9 483 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 FGF16O43320 207 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 CRTAPO75718 401 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 RAB5AP20339 215 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 P2RY4P51582 365 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 PRSS12P56730 875 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 HGFACQ04756 655 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 MFAP5Q13361 173 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 FAM166AQ6J272 317 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 DNM1P46Q6ZS02 220 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 H1FNTQ75WM6 255 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 LYG2Q86SG7 212 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 ZPBPQ9BS86 351 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 PBOV1Q9GZY1 135 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 DCAF16Q9NXF7 216 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 KNG1P01042 644 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 IFNA2P01563 188 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 SLC6A9P48067 706 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 CLRN1P58418 232 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 Q6ZRG5 221 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 TMEM234Q8WY98 164 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF775Q96BV0 537 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 C14orf144Q96I85 54 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 METTL8Q9H825 291 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 FBXO7Q9Y3I1 522 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 SOCS1O15524 211 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 SNAPC5O75971 98 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 CCL3P10147 92 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 G0S2P27469 103 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 CAV2P51636 162 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 SCAND1P57086 179 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 KIAA0141Q14154 515 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 SSPNQ14714 243 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 TSC22D1Q15714 1073 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 C4orf17Q53FE4 359 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 OR2A2Q6IF42 318 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 SKA3Q8IX90 412 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 OR2AJ1Q8NGZ0 328 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 ADAMTS17Q8TE56 1095 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 RAB22AQ9UL26 194 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF729A6NN14 1252 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 RER1O15258 196 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 TMEM127O75204 238 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 ONECUT2O95948 504 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 TTRP02766 147 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 GLI4P10075 376 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF345Q14585 488 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 OR5D14Q8NGL3 314 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 MITD1Q8WV92 249 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 OR5B2Q96R09 309 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 ATG101Q9BSB4 218 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 NCKAP5O14513 1909 aa12.55□□□□□ -0.4
SFSWAP-210ENST00000541286 AP4M1O00189 453 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 CRHP06850 196 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 OR3A4PP47883 348 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 MEF2DQ14814 521 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 FAM57BQ71RH2 274 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 MRGPRFQ96AM1 343 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 SIGLEC12Q96PQ1 595 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 CACFD1Q9UGQ2 172 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 SLC25A4P12235 298 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 IGFBP3P17936 291 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZBTB25P24278 435 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ASCL1P50553 236 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 DCAF7P61962 342 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF343Q6P1L6 599 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 GNRHR2Q96P88 292 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF700Q9H0M5 742 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 METTL7AQ9H8H3 244 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
SFSWAP-210ENST00000541286 UFSP2Q9NUQ7 469 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms