RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HES4Q9HCC6 221 aa21.52■■□□□ 1.04
CHFR-218ENST00000540963 FAM53CQ9NYF3 392 aa21.52■■□□□ 1.04
CHFR-218ENST00000540963 TSSC4Q9Y5U2 329 aaPredicted RBP21.52■■□□□ 1.04
CHFR-218ENST00000540963 MINOS1-NBL1R4GNA1 71 aa21.52■■□□□ 1.04
CHFR-218ENST00000540963 A0A1W2PRX2 142 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 GSC2O15499 205 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 SELENOFO60613 162 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 IGLV3-1P01715 115 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 ZNF728P0DKX0 622 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 EGFEM1PQ0D2K5 195 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 C16orf82Q7Z2V1 217 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 KRT77Q7Z794 578 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 HS3ST5Q8IZT8 346 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 NRIP2Q9BQI9 281 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 THTPAQ9BU02 230 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 FAM206AQ9NX38 181 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 ENPP5Q9UJA9 477 aa21.51■■□□□ 1.03
CHFR-218ENST00000540963 FAM90A22PA8MWA6 464 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 PRR23D1E9PI22 279 aaPredicted RBP21.5■■□□□ 1.03
CHFR-218ENST00000540963 K7N7A8 449 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 NXPH2O95156 264 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 PRR23D2P0DMB1 279 aaPredicted RBP21.5■■□□□ 1.03
CHFR-218ENST00000540963 IGHV1-8P0DP01 117 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 ALOX5APP20292 161 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 HAAOP46952 286 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 GK3PQ14409 553 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 ZNF684Q5T5D7 378 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 GIPC3Q8TF64 312 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 ZNF488Q96MN9 340 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 GPR61Q9BZJ8 451 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 KLHDC2Q9Y2U9 406 aa21.5■■□□□ 1.03
CHFR-218ENST00000540963 TMEM269A0A1B0GVZ9 245 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 CLIC3O95833 236 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 CST1P01037 141 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 NRASP01111 189 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 CEBPDP49716 269 aaPredicted RBP21.49■■□□□ 1.03
CHFR-218ENST00000540963 TMEM95Q3KNT9 176 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 SLC35D3Q5M8T2 416 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 KCTD18Q6PI47 426 aaPredicted RBP21.49■■□□□ 1.03
CHFR-218ENST00000540963 B9D2Q9BPU9 175 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 LAMP5Q9UJQ1 280 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 DNAH9Q9NYC9 4486 aa21.49■■□□□ 1.03
CHFR-218ENST00000540963 WI2-2373I1.2A0A1W2PRP0 233 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 E9PQ18 207 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 MPZP25189 248 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 KRTAP10-11P60412 298 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 CD69Q07108 199 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 DCTN2Q13561 401 aaKnown RBP21.48■■□□□ 1.03
CHFR-218ENST00000540963 DMRTC1Q5HYR2 192 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 PLBD1Q6P4A8 553 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 CENPVQ7Z7K6 275 aaPredicted RBP21.48■■□□□ 1.03
CHFR-218ENST00000540963 COMMD2Q86X83 199 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 SLC7A6OSQ96CW6 309 aaPredicted RBP21.48■■□□□ 1.03
CHFR-218ENST00000540963 AKR1E2Q96JD6 320 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 GPR84Q9NQS5 396 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 PIGLQ9Y2B2 252 aa21.48■■□□□ 1.03
CHFR-218ENST00000540963 TCRBV4S1A1TA0A5B7 111 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 ARRDC5A6NEK1 342 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 AQP12BA6NM10 295 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 H3BN98 237 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 DHRS3O75911 302 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 PIPP12273 146 aaPredicted RBP21.47■■□□□ 1.03
CHFR-218ENST00000540963 PRKACGP22612 351 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 DYNC1I2Q13409 638 aaKnown RBP21.47■■□□□ 1.03
CHFR-218ENST00000540963 TCTEX1D4Q5JR98 221 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 AQP12AQ8IXF9 295 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 MROQ9BYG7 248 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 PBOV1Q9GZY1 135 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 OR14J1Q9UGF5 321 aa21.47■■□□□ 1.03
CHFR-218ENST00000540963 DLGAP1O14490 977 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 ZNF254O75437 659 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 ERVK11-1P61568 191 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 MEF2CQ06413 473 aaPredicted RBP21.46■■□□□ 1.03
CHFR-218ENST00000540963 GINS1Q14691 196 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 TMEM42Q69YG0 159 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 OR51E1Q8TCB6 317 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 ZNF714Q96N38 554 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 YIPF3Q9GZM5 350 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 DNAJB9Q9UBS3 223 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 NUFIP1Q9UHK0 495 aaKnown RBP21.46■■□□□ 1.03
CHFR-218ENST00000540963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.46■■□□□ 1.03
CHFR-218ENST00000540963 SLC22A13Q9Y226 551 aa21.46■■□□□ 1.03
CHFR-218ENST00000540963 PQLC2LA1A4F0 135 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 CHRM2P08172 466 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 SLC34A1Q06495 639 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 IL18R1Q13478 541 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 CLVS2Q5SYC1 327 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 ZBTB49Q6ZSB9 765 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 CCDC121Q6ZUS5 278 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 GDPD3Q7L5L3 318 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 OR4X2Q8NGF9 303 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 MYDGFQ969H8 173 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 LRGUKQ96M69 825 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 TEAD3Q99594 435 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 LIN7BQ9HAP6 207 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 INPP5EQ9NRR6 644 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 HILPDAQ9Y5L2 63 aa21.45■■□□□ 1.02
CHFR-218ENST00000540963 ZNF737O75373 536 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 E2F6O75461 281 aa21.44■■□□□ 1.02
CHFR-218ENST00000540963 DNAJC8O75937 253 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms