RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 AQP10Q96PS8 301 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 RARRES2Q99969 163 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 EDEM2Q9BV94 578 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 DUSP15Q9H1R2 295 aaPredicted RBP11.42□□□□□ -0.58
MSH6-210ENST00000540021 SLCO1B1Q9Y6L6 691 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 A0A1W2PPE3 182 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNHIT1O43257 154 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF708P17019 499 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 EN2P19622 333 aaPredicted RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 SRYQ05066 204 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ADIRFQ15847 76 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF429Q86V71 674 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 THNSL2Q86YJ6 484 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF383Q8NA42 475 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 SCARF2Q96GP6 870 aaPredicted RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 RHOVQ96L33 236 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 FAM206AQ9NX38 181 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ST3GAL6Q9Y274 331 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 CD79AP11912 226 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 IGFBP3P17936 291 aaPredicted RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 CNN3Q15417 329 aaKnown RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 MR1Q95460 341 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 OR5B12Q96R08 314 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 MESP1Q9BRJ9 268 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF106Q9H2Y7 1883 aaKnown RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 RALGAPA1Q6GYQ0 2036 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 IGHV3-64DA0A0J9YX35 117 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 A0A1W2PPC4 97 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 CEBPZOSA8MTT3 80 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF587BE7ETH6 402 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 FGF16O43320 207 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 GPR137BO60478 399 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF133P52736 654 aaPredicted RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 TMEM50BP56557 158 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ACER2Q5QJU3 275 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 CYYR1Q96J86 154 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 RARRES3Q9UL19 164 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 MMP17Q9ULZ9 603 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 SRPK3Q9UPE1 567 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 WSB1Q9Y6I7 421 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 A0A1B0GTQ1 180 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ANKUB1A6NFN9 424 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 DHRS7CA6NNS2 312 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 SCRG1O75711 98 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 HOXC4P09017 264 aaPredicted RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 SSX2Q16385 188 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 NKAIN1Q4KMZ8 207 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ZNF610Q8N9Z0 462 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 TMEM230Q96A57 120 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 LMAN1LQ9HAT1 526 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 MYOZ1Q9NP98 299 aaPredicted RBP11.41□□□□□ -0.58
MSH6-210ENST00000540021 UFSP2Q9NUQ7 469 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 ANXA10Q9UJ72 324 aa11.41□□□□□ -0.58
MSH6-210ENST00000540021 FBP1P09467 338 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 RBP2P50120 134 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 LFNGQ8NES3 379 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 UBALD1Q8TB05 177 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 FRZBQ92765 325 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 CYTL1Q9NRR1 136 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.58
MSH6-210ENST00000540021 OR2B11Q5JQS5 317 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 VAX1Q5SQQ9 334 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 RTL6Q6ICC9 239 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 LINC00469Q8N7U9 141 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 POC1AQ8NBT0 407 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 ADIPOR1Q96A54 375 aa11.4□□□□□ -0.58
MSH6-210ENST00000540021 C19orf25Q9UFG5 118 aaPredicted RBP11.4□□□□□ -0.58
MSH6-210ENST00000540021 STRAPQ9Y3F4 350 aaKnown RBP11.4□□□□□ -0.58
MSH6-210ENST00000540021 KIF26AQ9ULI4 1882 aaPredicted RBP11.4□□□□□ -0.58
MSH6-210ENST00000540021 COLCA2A8K830 154 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 C9JQL5 133 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 CLN5O75503 358 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 IFNA10P01566 189 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 ISG15P05161 165 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 RUNX1Q01196 453 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 TLE4Q04727 773 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 LIPHQ8WWY8 451 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 RNF166Q96A37 237 aaPredicted RBP11.4□□□□□ -0.59
MSH6-210ENST00000540021 ZNF845Q96IR2 970 aaPredicted RBP11.4□□□□□ -0.59
MSH6-210ENST00000540021 MEGF10Q96KG7 1140 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 RTBDNQ9BSG5 229 aaPredicted RBP11.4□□□□□ -0.59
MSH6-210ENST00000540021 PLK3Q9H4B4 646 aa11.4□□□□□ -0.59
MSH6-210ENST00000540021 FANCMQ8IYD8 2048 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 LIPT2A6NK58 231 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 MBPP02686 304 aaPredicted RBP11.39□□□□□ -0.59
MSH6-210ENST00000540021 DMWDQ09019 674 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 ALKBH3Q96Q83 286 aaPredicted RBP11.39□□□□□ -0.59
MSH6-210ENST00000540021 KCNK17Q96T54 332 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 NAA60Q9H7X0 242 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 LANCL2Q9NS86 450 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 LHFPL6Q9Y693 200 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 IGHV4-34P06331 123 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 RAB1AP62820 205 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 SLC25A26Q70HW3 274 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 SLC16A14Q7RTX9 510 aa11.39□□□□□ -0.59
MSH6-210ENST00000540021 INTS12Q96CB8 462 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms