RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 THBS3P49746 956 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 DOC2BQ14184 412 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 CEP78Q5JTW2 689 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 HAGHLQ6PII5 290 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 SHFQ7M4L6 423 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 LINC00471Q8N535 108 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 POC1AQ8NBT0 407 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 OR6N2Q8NGY6 317 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 INTS14Q96SY0 518 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 LIN7BQ9HAP6 207 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 LSM4Q9Y4Z0 139 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 OR5B21A6NL26 309 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 K7N7A8 449 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 ARPC2O15144 300 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 RAMP3O60896 148 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 NOS1APO75052 506 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 SEMG1P04279 462 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 RRM2P31350 389 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 MAP2K3P46734 347 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 ABCA11PQ4W5N1 156 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 SPATA24Q86W54 205 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 ERI1Q8IV48 349 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 OR8D4Q8NGM9 314 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 MUC7Q8TAX7 377 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 FAM81AQ8TBF8 368 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 CAPSLQ8WWF8 208 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 TFAP2CQ92754 450 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 ITFG2Q969R8 447 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 PYURFQ96I23 114 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF488Q96MN9 340 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 OR8B4Q96RC9 309 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF649Q9BS31 505 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 VNN3Q9NY84 501 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 BAIAP2Q9UQB8 552 aa9.26□□□□□ -0.93
CLSTN3-209ENST00000539982 TCRBV3S1A0A5B6 114 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 AQP12BA6NM10 295 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 FKBP6O75344 327 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 ATP6V1G2O95670 118 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 PGA5P0DJD9 388 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 ATP6V1B2P21281 511 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 GSTT1P30711 240 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 BRS3P32247 399 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 MYCNOSP40205 109 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 ACTA2P62736 377 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 ACTG2P63267 376 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 ACTC1P68032 377 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 ACTA1P68133 377 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 IL18R1Q13478 541 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 DMRTC1Q5HYR2 192 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 CYP2R1Q6VVX0 501 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 RASSF6Q6ZTQ3 369 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 MOB3CQ70IA8 216 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 AQP12AQ8IXF9 295 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 OSR2Q8N2R0 312 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 OR8B12Q8NGG6 310 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 NDNFQ8TB73 568 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 NSMCE2Q96MF7 247 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 TSSK6Q9BXA6 273 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 GORASP2Q9H8Y8 452 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 TBC1D23Q9NUY8 699 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 OR14J1Q9UGF5 321 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 V9GYQ6 96 aa9.25□□□□□ -0.93
CLSTN3-209ENST00000539982 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 MEX3AA1L020 520 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 KRT36O76013 467 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 NXPH2O95156 264 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 GASTP01350 101 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 IFNGP01579 166 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 LYNP07948 512 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 CD24P25063 80 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 HTR1DP28221 377 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 SLC6A1P30531 599 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 HMGA2P52926 109 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 ZFP1Q6P2D0 407 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 ZBTB49Q6ZSB9 765 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF573Q86YE8 665 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 OR4Q3Q8NH05 313 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 THEM6Q8WUY1 208 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF714Q96N38 554 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 RBM14Q96PK6 669 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 ASCL2Q99929 193 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 NRIP2Q9BQI9 281 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 DCLRE1BQ9H816 532 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 HES4Q9HCC6 221 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 S100A14Q9HCY8 104 aa9.24□□□□□ -0.93
CLSTN3-209ENST00000539982 IGHV2-26A0A0B4J1V2 119 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 A0A0U1RQV5 110 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 TCRBV5S2A0A599 114 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 PSMB11A5LHX3 300 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 RIIAD1A6NNX1 92 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 J3QT63 122 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 OR2F2O95006 317 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 AMY1AP04745 511 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 AMY2AP04746 511 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 FABP3P05413 133 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 ATP6V1B1P15313 513 aa9.23□□□□□ -0.93
CLSTN3-209ENST00000539982 HAAOP46952 286 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms