RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CTRB1P17538 263 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 CRYGSP22914 178 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 CTSSP25774 331 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 AKR1C3P42330 323 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 MLF1P58340 268 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 PSG4Q00888 419 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 CTRB2Q6GPI1 263 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 SULF2Q8IWU5 870 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 FBXL14Q8N1E6 418 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 OR5L1Q8NGL2 311 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 OR2Y1Q8NGV0 311 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
UBE3B-210ENST00000539599 C14orf166Q9Y224 244 aaKnown RBP12.22□□□□□ -0.45
UBE3B-210ENST00000539599 A0A096LPE4 126 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 A0A1W2PPZ6 126 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 ONECUT2O95948 504 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 CELA3AP09093 270 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 HKR1P10072 659 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 NPBWR2P48146 333 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 ZNF84P51523 738 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 PIGPP57054 158 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 CARD18P57730 90 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 TAS2R46P59540 309 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 ACTBL2Q562R1 376 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 GGNBP1Q5YKI7 109 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 SPINK14Q6IE38 97 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 CALHM1Q8IU99 346 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 OR10D3Q8NH80 312 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 PIGCQ92535 297 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 SPTSSAQ969W0 71 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 SH2D2AQ9NP31 389 aa12.21□□□□□ -0.45
UBE3B-210ENST00000539599 IFNA2P01563 188 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 OR5AC1P0C628 307 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 CD79AP11912 226 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 MUC1P15941 1255 aaPredicted RBP12.21□□□□□ -0.46
UBE3B-210ENST00000539599 RBMXP38159 391 aaKnown RBP12.21□□□□□ -0.46
UBE3B-210ENST00000539599 RAC1P63000 192 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 HIST1H3AP68431 136 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 TRIM61Q5EBN2 209 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 HIST2H3PS2Q5TEC6 136 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 HIST2H3AQ71DI3 136 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 SLC16A14Q7RTX9 510 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 LYZL2Q7Z4W2 148 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 ESX1Q8N693 406 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 STOML3Q8TAV4 291 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 PP6455Q8WZ26 134 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 NAT6Q93015 286 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 CMSS1Q9BQ75 279 aaKnown RBP12.21□□□□□ -0.46
UBE3B-210ENST00000539599 TM2D1Q9BX74 207 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 DNTTIP1Q9H147 329 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 SAV1Q9H4B6 383 aaPredicted RBP12.21□□□□□ -0.46
UBE3B-210ENST00000539599 WDR54Q9H977 334 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 IL36RNQ9UBH0 155 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 ANXA10Q9UJ72 324 aa12.21□□□□□ -0.46
UBE3B-210ENST00000539599 EIF1BO60739 113 aaKnown RBP12.2□□□□□ -0.46
UBE3B-210ENST00000539599 MED6O75586 246 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 FHITP49789 147 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 IL15RAQ13261 267 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 FAM27BQ5VT28 67 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 H3F3CQ6NXT2 135 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 SLC22A25Q6T423 547 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 AAED1Q7RTV5 226 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 OR1F12Q8NHA8 337 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 NAA11Q9BSU3 229 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-210ENST00000539599 FBXL17Q9UF56 701 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 SMG1Q96Q15 3661 aaKnown RBP12.2□□□□□ -0.46
UBE3B-210ENST00000539599 LRRC3CA6NJW4 275 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 FOLR3P41439 243 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 IL11RAQ14626 422 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
UBE3B-210ENST00000539599 RNF141Q8WVD5 230 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 PADI1Q9ULC6 663 aa12.2□□□□□ -0.46
UBE3B-210ENST00000539599 PCP4L1A6NKN8 68 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 ZNF716A6NP11 495 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 CBR3O75828 277 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 C1QL1O75973 258 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 CYCSP99999 105 aaKnown RBP12.19□□□□□ -0.46
UBE3B-210ENST00000539599 EXT1Q16394 746 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 FOXL2NBQ6ZUU3 175 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 CLRN3Q8NCR9 226 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 BORCS8Q96FH0 119 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 WNT5BQ9H1J7 359 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 A0A087WZY1 265 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 A0A1B0GW55 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 NXPH3O95157 252 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 FCGR3AP08637 254 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4L2P0CJ85 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4L3P0CJ86 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4L4P0CJ87 422 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4L5P0CJ88 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4L6P0CJ89 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 DUX4L7P0CJ90 424 aa12.19□□□□□ -0.46
UBE3B-210ENST00000539599 EDN3P14138 238 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms