RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 C1QL4Q86Z23 238 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 FAM185AQ8N0U4 392 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 ZFP82Q8N141 532 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 WDSUB1Q8N9V3 476 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 MAFIPQ8WZ33 124 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 NABP1Q96AH0 204 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 LIN37Q96GY3 246 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-209ENST00000539584 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 DEFB126Q9BYW3 111 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 SEBOXQ9HB31 216 aaPredicted RBP11.57□□□□□ -0.56
UBE3B-209ENST00000539584 KCNJ16Q9NPI9 418 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 C19orf12Q9NSK7 152 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 IL36GQ9NZH8 169 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 MTCH2Q9Y6C9 303 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 PHF3Q92576 2039 aaKnown RBP11.57□□□□□ -0.56
UBE3B-209ENST00000539584 DNAH14Q0VDD8 3507 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 IGKV1D-8A0A087WSZ0 117 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 BTBD17A6NE02 478 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 UMAD1C9J7I0 102 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 SRFP11831 508 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 SFTPDP35247 375 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 MRPS34P82930 218 aaKnown RBP11.57□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF266Q14584 549 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 GNMTQ14749 295 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 ABHD14BQ96IU4 210 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 TECTBQ96PL2 329 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 RASL10BQ96S79 203 aa11.57□□□□□ -0.56
UBE3B-209ENST00000539584 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
UBE3B-209ENST00000539584 PTRH2Q9Y3E5 179 aaKnown RBP11.57□□□□□ -0.56
UBE3B-209ENST00000539584 A0A0C4DFX4 3053 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 NPIPA2E9PIF3 369 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 NPIPA3F8WFD2 350 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 DNPH1O43598 174 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 CDS2O95674 445 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF616Q08AN1 781 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 RSPO1Q2MKA7 263 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-209ENST00000539584 NPRL2Q8WTW4 380 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 ERGIC1Q969X5 290 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 PLEK2Q9NYT0 353 aa11.56□□□□□ -0.56
UBE3B-209ENST00000539584 NSG1A0A0A6YYJ2 146 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 RAMP1O60894 148 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SCRG1O75711 98 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SCGB1D2O95969 90 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 OR5AC1P0C628 307 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF14P17017 642 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 RAB5AP20339 215 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 ANOS1P23352 680 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 CHATP28329 748 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 RBP2P50120 134 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 COL19A1Q14993 1142 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 LCN10Q6JVE6 187 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 FBXW12Q6X9E4 464 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF100Q8IYN0 542 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 MAML2Q8IZL2 1156 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 TMEM123Q8N131 208 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SLC25A45Q8N413 288 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 LRRC18Q8N456 261 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 TCTEX1D2Q8WW35 142 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 PIGTQ969N2 578 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SGK3Q96BR1 496 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 BCO1Q9HAY6 547 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF286AQ9HBT8 521 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SPACA1Q9HBV2 294 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 AK3Q9UIJ7 227 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 FOXD3Q9UJU5 478 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 RARRES3Q9UL19 164 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 CHCHD2Q9Y6H1 151 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 PIGBOS1A0A0B4J2F0 54 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 TERTO14746 1132 aaKnown RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 PRH1P02810 166 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SNRNP70P08621 437 aaKnown RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 AFF3P51826 1226 aaKnown RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 RAB35Q15286 201 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF385CQ66K41 422 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 TMEM211Q6ICI0 200 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 DNASE2BQ8WZ79 361 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 MOB3AQ96BX8 217 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 MSI2Q96DH6 328 aaKnown RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SPSB2Q99619 263 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SF3B5Q9BWJ5 86 aaKnown RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SMIM3Q9BZL3 60 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 SLC2A9Q9NRM0 540 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
UBE3B-209ENST00000539584 ZMAT5Q9UDW3 170 aaKnown RBP11.55□□□□□ -0.56
UBE3B-209ENST00000539584 KNL1Q8NG31 2342 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 OR5H15A6NDH6 313 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 GJE1A6NN92 205 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 M0R036 132 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 SGCEO43556 437 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 IFNA17P01571 189 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 ZNF806P0C7X5 589 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 CRYGSP22914 178 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 ACKR3P25106 362 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 S100PP25815 95 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 DSCR4P56555 118 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-209ENST00000539584 STARD6P59095 220 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 CLINT1Q14677 625 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms