RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 H3F3AP84243 136 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 AWAT1Q58HT5 328 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 PHYHD1Q5SRE7 291 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 PLXDC2Q6UX71 529 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 NABP1Q96AH0 204 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 NAA11Q9BSU3 229 aaPredicted RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 FAAP24Q9BTP7 215 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 SUCNR1Q9BXA5 334 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 METTL9Q9H1A3 318 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 WFDC1Q9HC57 220 aa8.44□□□□□ -1.06
CDH13-204ENST00000539548 STRAPQ9Y3F4 350 aaKnown RBP8.44□□□□□ -1.06
CDH13-204ENST00000539548 ONECUT2O95948 504 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 SCGB1D2O95969 90 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 S100A9P06702 114 aaKnown RBP8.43□□□□□ -1.06
CDH13-204ENST00000539548 S100A6P06703 90 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 SNRNP70P08621 437 aaKnown RBP8.43□□□□□ -1.06
CDH13-204ENST00000539548 AKR1C3P42330 323 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 GLP1RP43220 463 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 CAMLGP49069 296 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 MTCP1P56278 107 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 IL13RA2Q14627 380 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 AKIRIN2Q53H80 203 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 SGK3Q96BR1 496 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 SPACA9Q96E40 222 aaPredicted RBP8.43□□□□□ -1.06
CDH13-204ENST00000539548 C18orf12Q96KH6 178 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 ANGPTL4Q9BY76 406 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 PARP12Q9H0J9 701 aaKnown RBP8.43□□□□□ -1.06
CDH13-204ENST00000539548 SEBOXQ9HB31 216 aaPredicted RBP8.43□□□□□ -1.06
CDH13-204ENST00000539548 SPACA1Q9HBV2 294 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 METTL1Q9UBP6 276 aaKnown RBP8.43□□□□□ -1.06
CDH13-204ENST00000539548 AK3Q9UIJ7 227 aa8.43□□□□□ -1.06
CDH13-204ENST00000539548 EML6Q6ZMW3 1958 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 A0A087WZY1 265 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 A0A1B0GW64 132 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ZNF850A8MQ14 1090 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 M0R135 149 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 NME2P1O60361 137 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 RRADP55042 308 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 SP6Q3SY56 376 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ABCA11PQ4W5N1 156 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ASCL4Q6XD76 172 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 LIAT1Q6ZQX7 453 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 NANPQ8TBE9 248 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 RTN4IP1Q8WWV3 396 aaPredicted RBP8.42□□□□□ -1.06
CDH13-204ENST00000539548 SPTSSAQ969W0 71 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 SPSB1Q96BD6 273 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ZNF799Q96GE5 643 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 RASL10BQ96S79 203 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ZNF251Q9BRH9 671 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 C19orf12Q9NSK7 152 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 SPAG17Q6Q759 2223 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 DHHO43323 396 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 VAMP5O95183 116 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 TIAF1O95411 115 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 GLAP06280 429 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 OR5AC1P0C628 307 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 RAB5AP20339 215 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ACKR3P25106 362 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 DUSP1P28562 367 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ZNF616Q08AN1 781 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 RHEBQ15382 184 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 RSU1Q15404 277 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 SHBQ15464 509 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 CLEC9AQ6UXN8 241 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 ZNF574Q6ZN55 896 aaPredicted RBP8.42□□□□□ -1.06
CDH13-204ENST00000539548 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 TMEM123Q8N131 208 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 LRRC18Q8N456 261 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 TMEM156Q8N614 296 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 HPSE2Q8WWQ2 592 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 TOMM40LQ969M1 308 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 MALSU1Q96EH3 234 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 GNRHR2Q96P88 292 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 IP6K3Q96PC2 410 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 DEFB126Q9BYW3 111 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 EIF5A2Q9GZV4 153 aaKnown RBP8.42□□□□□ -1.06
CDH13-204ENST00000539548 GPR173Q9NS66 373 aa8.42□□□□□ -1.06
CDH13-204ENST00000539548 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 M0R036 132 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 TP53I11O14683 189 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 TERTO14746 1132 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 ST8SIA3O43173 380 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 EIF1BO60739 113 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 SCRG1O75711 98 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 CD63P08962 238 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 DBHP09172 617 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 CHATP28329 748 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 OPRM1P35372 400 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 MAS1LP35410 378 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 UCP3P55916 312 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 RAB1AP62820 205 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 TAF9Q16594 264 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 FAM27BQ5VT28 67 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 RBMS3Q6XE24 437 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 LGI3Q8N145 548 aa8.41□□□□□ -1.06
CDH13-204ENST00000539548 SNIP1Q8TAD8 396 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 INTS12Q96CB8 462 aaKnown RBP8.41□□□□□ -1.06
CDH13-204ENST00000539548 MSI2Q96DH6 328 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms