RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CCL1P22362 96 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 HNRNPA2B1P22626 353 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 PLCXD2Q0VAA5 305 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 SLC22A25Q6T423 547 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF721Q8TF20 911 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 PACRGQ96M98 296 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 RPP25Q9BUL9 199 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 FAM86C1Q9NVL1 165 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 ATXN7L1Q9ULK2 861 aaPredicted RBP16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 OR5AC1P0C628 307 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 TRGC1P0CF51 173 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 GIMD1P0DJR0 217 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 DUSP1P28562 367 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 CEBPGP53567 150 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 RAB4BP61018 213 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 KISS1Q15726 138 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 SP6Q3SY56 376 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 FBXW12Q6X9E4 464 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 LYZL2Q7Z4W2 148 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 C1QL2Q7Z5L3 287 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 SLC35E3Q7Z769 313 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 OR5D18Q8NGL1 313 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 OR2G3Q8NGZ4 309 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 TM2D1Q9BX74 207 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 MCTS1Q9ULC4 181 aaKnown RBP16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 CA14Q9ULX7 337 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 LHFPL6Q9Y693 200 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 SLCO1B1Q9Y6L6 691 aa16.29■□□□□ 0.2
SFSWAP-207ENST00000538548 HSPB1P04792 205 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF43P17038 809 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF121P58317 390 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF266Q14584 549 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 TMEM196Q5HYL7 178 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 DOK3Q7L591 496 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 SUCNR1Q9BXA5 334 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 ZNF319Q9P2F9 582 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 TP53TG5Q9Y2B4 290 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 DDAH2O95865 285 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 TLE3Q04726 772 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 TMEM176BQ3YBM2 270 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 HLA-DQA1Q5Y7H0 255 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 CYB561D1Q8N8Q1 229 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 ABHD5Q8WTS1 349 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 RTN4IP1Q8WWV3 396 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 MISP3Q96FF7 219 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 LANCL2Q9NS86 450 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 RCL1Q9Y2P8 373 aaKnown RBP16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 POLR1DQ9Y2S0 133 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 LIPGQ9Y5X9 500 aa16.28■□□□□ 0.2
SFSWAP-207ENST00000538548 TGOLN2O43493 480 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 OR5H8P0DN80 308 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 CEACAM6P40199 344 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 RGS19P49795 217 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 HHEXQ03014 270 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 DLX2Q07687 328 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 EIF3IQ13347 325 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 AKR1C8PQ5T2L2 129 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 OR52M1Q8NGK5 317 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 OR2AJ1Q8NGZ0 328 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 FRZBQ92765 325 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 C18orf12Q96KH6 178 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 PISDQ9UG56 409 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 AK3Q9UIJ7 227 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 ANXA10Q9UJ72 324 aa16.27■□□□□ 0.2
SFSWAP-207ENST00000538548 SMCO3A2RU48 225 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 CDRT15L2A8MXV6 281 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 TMEM150CB9EJG8 249 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 H0YIG0 161 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 SCAF4O95104 1147 aaKnown RBP16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 ATP6V0CP27449 155 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 IL2RGP31785 369 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 EWSR1Q01844 656 aaKnown RBP eCLIP16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 ABCA11PQ4W5N1 156 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 ZFP62Q8NB50 900 aaPredicted RBP16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 OR14K1Q8NGZ2 314 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 BOD1Q96IK1 185 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 PLA2G2FQ9BZM2 168 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 CHST11Q9NPF2 352 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 KLHL13Q9P2N7 655 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 FOXD3Q9UJU5 478 aaPredicted RBP16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 WSB1Q9Y6I7 421 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 LRP4O75096 1905 aa16.27■□□□□ 0.19
SFSWAP-207ENST00000538548 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 NTSR1P30989 418 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 SFTPDP35247 375 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 BIDP55957 195 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 FOXO1Q12778 655 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 GNMTQ14749 295 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 ICAM4Q14773 271 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 ZNF506Q5JVG8 444 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 LIAT1Q6ZQX7 453 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 C9orf40Q8IXQ3 194 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 OR14L1PQ8NHC6 308 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 TSLPQ969D9 159 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 FAM210BQ96KR6 192 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 NEU1Q99519 415 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 EMC6Q9BV81 110 aa16.26■□□□□ 0.19
SFSWAP-207ENST00000538548 HSF4Q9ULV5 492 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms