RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 RTL10Q7L3V2 364 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 GRINAQ7Z429 371 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 P4HA3Q7Z4N8 544 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 C5orf24Q7Z6I8 188 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 H1FOOQ8IZA3 346 aaPredicted RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 MAML2Q8IZL2 1156 aaPredicted RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 SLC24A4Q8NFF2 622 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 OR2D3Q8NGH3 330 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 OR14L1PQ8NHC6 308 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 ADAMTS18Q8TE60 1221 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 TMEM170AQ8WVE7 144 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 FGF14Q92915 247 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 MRGPRX4Q96LA9 322 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 ZNF558Q96NG5 402 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SLC22A12Q96S37 553 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SPIN2AQ99865 258 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 PTPN18Q99952 460 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SPIN2BQ9BPZ2 258 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CCDC3Q9BQI4 270 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CRLF2Q9HC73 371 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 PARD6AQ9NPB6 346 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 CISD1Q9NZ45 108 aaKnown RBP5.88□□□□□ -1.47
USP28-207ENST00000538475 GSKIPQ9P0R6 139 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 B9D1Q9UPM9 204 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 SLC7A11Q9UPY5 501 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 HS3ST3B1Q9Y662 390 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 KMT2EQ8IZD2 1858 aa5.88□□□□□ -1.47
USP28-207ENST00000538475 IGKV1D-42A0A075B6H8 117 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 NSG1A0A0A6YYJ2 146 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 TGIF2-C20orf24A0A0A6YYL0 155 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 IGLV1-36A0A0B4J1U3 117 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 EDDM13A0A1B0GTR0 161 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 LOC102723971A0A1B0GUV8 181 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 LOC107986453A0A1B0GWG9 222 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 PRSS37A4D1T9 235 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 MYADML2A6NDP7 307 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 WIPF3A6NGB9 483 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 RAMP1O60894 148 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 PIAS2O75928 621 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CSTAP01040 98 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 IFNA1P01562 189 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CT45A8P0DMV1 189 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CT45A9P0DMV2 189 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CYBAP13498 195 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 ZNF43P17038 809 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 GRPRP30550 384 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 WASP42768 502 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 EMDP50402 254 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 UCP3P55916 312 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 RPL27P61353 136 aaKnown RBP5.87□□□□□ -1.47
USP28-207ENST00000538475 LCN2P80188 198 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 RPL18Q07020 188 aaKnown RBP5.87□□□□□ -1.47
USP28-207ENST00000538475 UNC119Q13432 240 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 ICAM4Q14773 271 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 HERPUD1Q15011 391 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CT45A2Q5DJT8 189 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 LRRC73Q5JTD7 316 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 C1orf189Q5VU69 101 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CACUL1Q86Y37 369 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 FAM185AQ8N0U4 392 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CISD2Q8N5K1 135 aaKnown RBP5.87□□□□□ -1.47
USP28-207ENST00000538475 C2orf73Q8N5S3 287 aaPredicted RBP5.87□□□□□ -1.47
USP28-207ENST00000538475 GVQW1Q8N7I0 195 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 OR4D6Q8NGJ1 314 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 OR13C9Q8NGT0 318 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 OR13G1Q8NGZ3 307 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 OR4X1Q8NH49 305 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 FAM213BQ8TBF2 198 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 IFI44Q8TCB0 444 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 ZPLD1Q8TCW7 415 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 DTD1Q8TEA8 209 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 KCNE4Q8WWG9 221 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 MRPL24Q96A35 216 aaKnown RBP5.87□□□□□ -1.47
USP28-207ENST00000538475 DDIT4LQ96D03 193 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 TSPAN32Q96QS1 320 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 MIEN1Q9BRT3 115 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CABLES2Q9BTV7 478 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 ULBP3Q9BZM4 244 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 LPAR5Q9H1C0 372 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 TXNIPQ9H3M7 391 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CHODLQ9H9P2 273 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 SDF2L1Q9HCN8 221 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 G6PC2Q9NQR9 355 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 THADAQ6YHU6 1953 aa5.87□□□□□ -1.47
USP28-207ENST00000538475 KIAA2026Q5HYC2 2103 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 TET1Q8NFU7 2136 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 K7EP13 123 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 KCNAB3O43448 404 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 TNFSF13O75888 250 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 DDNO94850 711 aaPredicted RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 IL18BPO95998 194 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 PNPP00491 289 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 TIMP1P01033 207 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 PFN1P07737 140 aaKnown RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 ZNF888P0CJ79 500 aaPredicted RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 PGA3P0DJD8 388 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 CEBPBP17676 345 aa5.86□□□□□ -1.47
USP28-207ENST00000538475 SRP14P37108 136 aaKnown RBP5.86□□□□□ -1.47
USP28-207ENST00000538475 CDKN1BP46527 198 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms