RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 PSKH1P11801 424 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF35P13682 527 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TUBG1P23258 451 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 GCH1P30793 250 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 CALCRP30988 508 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OTX1P32242 354 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 SERPINF1P36955 418 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FABP6P51161 128 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 PRKXP51817 358 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 AP2S1P53680 142 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 HCCSP53701 268 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 UCP2P55851 309 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 P2RX3P56373 397 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 KLF3P57682 345 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF121P58317 390 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 RRAS2P62070 204 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 SNRPD2P62316 118 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 BTG1P62324 171 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 RPS25P62851 125 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 MXD1Q05195 221 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TPBGQ13641 420 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TATDN3Q17R31 274 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 SPATA46Q5T0L3 261 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 BCL2L15Q5TBC7 163 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 HACD4Q5VWC8 232 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 HIST2H2BCQ6DN03 193 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 C22orf42Q6IC83 251 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 CNIH2Q6PI25 160 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 DEGS2Q6QHC5 323 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF782Q6ZMW2 699 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 RFPL4BQ6ZWI9 263 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 UTS2BQ765I0 119 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 MRPL21Q7Z2W9 205 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF679Q8IYX0 411 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF101Q8IZC7 436 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FBXL14Q8N1E6 418 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 MUC15Q8N387 334 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 Q8N402 240 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FTMTQ8N4E7 242 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 PAQR4Q8N4S7 273 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 YIPF7Q8N8F6 280 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 PNLDC1Q8NA58 520 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 SEMA6DQ8NFY4 1073 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OR52I1Q8NGK6 324 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OR10S1Q8NGN2 331 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OR1J1Q8NGS3 322 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 DEDD2Q8WXF8 326 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ACOT12Q8WYK0 555 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 CREB3L1Q96BA8 519 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TRMT61AQ96FX7 289 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FYTTD1Q96QD9 318 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OR8B4Q96RC9 309 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 CCL19Q99731 98 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 DHRS9Q9BPW9 319 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TMEM204Q9BSN7 226 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 BEX2Q9BXY8 128 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OPA3Q9H6K4 179 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF442Q9H7R0 627 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 MOB1AQ9H8S9 216 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FGF20Q9NP95 211 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 DYNLRB1Q9NP97 96 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TUBG2Q9NRH3 451 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 RBFOX1Q9NWB1 397 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 SLCO1C1Q9NYB5 712 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 CLEC2DQ9UHP7 191 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 GNG8Q9UK08 70 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FBXO9Q9UK97 447 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 COPS3Q9UNS2 423 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 LRP12Q9Y561 859 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 USP9XQ93008 2570 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 LRRK2Q5S007 2527 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 PKDREJQ9NTG1 2253 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 A0A0G2JMP0 313 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 TRDV1A0A1B0GX56 115 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 GGT3PA6NGU5 568 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 ACOD1A6NK06 481 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 E7EQL1 145 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 INMT-MINDY4F8WBC2 141 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 H7C1Q1 480 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 J3QLW9 94 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 M0R233 179 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 PLA2G10O15496 165 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 XRCC2O43543 280 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 TIMM8AO60220 97 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-208ENST00000538266 GPRIN2O60269 458 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 NGFP01138 241 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 RAF1P04049 648 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 HLA-DPB1P04440 258 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 SLC2A1P11166 492 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 ARSBP15848 533 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 SELEP16581 610 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF19P17023 458 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 M6PRP20645 277 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 GALP22466 123 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 LOXP28300 417 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-208ENST00000538266 FGF9P31371 208 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-208ENST00000538266 DCTDP32321 178 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 THBS4P35443 961 aa3.67□□□□□ -1.82
SNHG1-208ENST00000538266 GLRXP35754 106 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms