RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.41
USP44-203ENST00000537435 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.41
USP44-203ENST00000537435 LSM5Q9Y4Y9 91 aaKnown RBP12.46□□□□□ -0.41
USP44-203ENST00000537435 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 GJE1A6NN92 205 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 ZNF850A8MQ14 1090 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 H7C2Y5 167 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 FBXO24O75426 580 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 PIGPP57054 158 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 RAC3P60763 192 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 HFEQ30201 348 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 OR2Y1Q8NGV0 311 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 AKR7LQ8NHP1 331 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 DYRK2Q92630 601 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 HLA-CQ95604 372 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 BORCS8Q96FH0 119 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 CPNE2Q96FN4 548 aaPredicted RBP12.46□□□□□ -0.42
USP44-203ENST00000537435 ALKBH3Q96Q83 286 aaPredicted RBP12.46□□□□□ -0.42
USP44-203ENST00000537435 NRIP2Q9BQI9 281 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 SULT4A1Q9BR01 284 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 TUBD1Q9UJT1 453 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 HSF4Q9ULV5 492 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 PRELID3BQ9Y3B1 194 aa12.46□□□□□ -0.42
USP44-203ENST00000537435 SNAPINO95295 136 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 SCGB1D2O95969 90 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 CFIP05156 583 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 FCGR3AP08637 254 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 CST2P09228 141 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 B4GALT1P15291 398 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 ZNF32P17041 273 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 FCGR2CP31995 323 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 NPBWR1P48145 328 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 RBP2P50120 134 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 CAV2P51636 162 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 DHRS7BQ6IAN0 325 aaPredicted RBP12.45□□□□□ -0.42
USP44-203ENST00000537435 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 ESX1Q8N693 406 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 PRRX2Q99811 253 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 NECAP2Q9NVZ3 263 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 FBXL17Q9UF56 701 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 ARID1AO14497 2285 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 A0A0G2JMM0 328 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 A0A1W2PPB8 328 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 A0A1W2PRS3 328 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 KIR3DP1A8MWS1 328 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 NDUFA2O43678 99 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 FARS2O95363 451 aaKnown RBP12.45□□□□□ -0.42
USP44-203ENST00000537435 CST4P01036 141 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 PVALBP20472 110 aaPredicted RBP12.45□□□□□ -0.42
USP44-203ENST00000537435 CHATP28329 748 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 SULT1A2P50226 295 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 B3GALT5-AS1P59052 145 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 SP6Q3SY56 376 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 SMIM3Q9BZL3 60 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
USP44-203ENST00000537435 IGKV1-12A0A0C4DH73 117 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 GEMIN2O14893 280 aaKnown RBP12.44□□□□□ -0.42
USP44-203ENST00000537435 IGKV1D-12P01611 117 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 DTYMKP23919 212 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 HTR5AP47898 357 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 TMEM33P57088 247 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 PIGYQ3MUY2 71 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 DHRS11Q6UWP2 260 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 LHFPL2Q6ZUX7 228 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 OR14L1PQ8NHC6 308 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 MARS2Q96GW9 593 aaKnown RBP12.44□□□□□ -0.42
USP44-203ENST00000537435 RCC2Q9P258 522 aaKnown RBP12.44□□□□□ -0.42
USP44-203ENST00000537435 FAM221AA4D161 298 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 NRASP01111 189 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 OR5AC1P0C628 307 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 ZNF728P0DKX0 622 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 SRD5A2P31213 254 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 CARD18P57730 90 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 FXYD4P59646 89 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 AAED1Q7RTV5 226 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 OR10Z1Q8NGY1 313 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 CPT1CQ8TCG5 803 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
USP44-203ENST00000537435 KCNIP3Q9Y2W7 256 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 AMDHD2Q9Y303 409 aa12.44□□□□□ -0.42
USP44-203ENST00000537435 OR6C6A6NF89 314 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 ZNF716A6NP11 495 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 RNASEK-C17orf49H0YIS7 233 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 AGPAT2O15120 278 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 DNPH1O43598 174 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 CXCL13O43927 109 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 JTBO76095 146 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
USP44-203ENST00000537435 FOLR3P41439 243 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 ID4P47928 161 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 PSG4Q00888 419 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 TMEM187Q14656 261 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 ABCA11PQ4W5N1 156 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 GGNQ86UU5 652 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 OR10AD1Q8NGE0 317 aa12.43□□□□□ -0.42
USP44-203ENST00000537435 RTN4IP1Q8WWV3 396 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms