RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ZNF239Q16600 458 aaKnown RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 Q3ZCU0 254 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CHRFAM7AQ494W8 412 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SLC22A6Q4U2R8 563 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 ZNF542PQ5EBM4 170 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 HLA-DQA1Q5Y7H0 255 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 ADAM5Q6NVV9 412 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 RPUSD3Q6P087 351 aaKnown RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CBLN3Q6UW01 205 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 GLIPR1L1Q6UWM5 242 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 COX15Q7KZN9 410 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 TMPRSS9Q7Z410 1059 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 GRINAQ7Z429 371 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 MARCH3Q86UD3 253 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 PNLDC1Q8NA58 520 aaKnown RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SUMF2Q8NBJ7 301 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CSNK2A3Q8NEV1 391 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 OR13C9Q8NGT0 318 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 OR51F2Q8NH61 342 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CD300LFQ8TDQ1 290 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 ST7LQ8TDW4 575 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 TMEM234Q8WY98 164 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 ROBO4Q8WZ75 1007 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 SGK3Q96BR1 496 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 NKX3-1Q99801 234 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 GINS3Q9BRX5 216 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 RTBDNQ9BSG5 229 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 GGACTQ9BVM4 153 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 TBL1XR1Q9BZK7 514 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 PBOV1Q9GZY1 135 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 OR10A2Q9H208 303 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 CENPMQ9NSP4 180 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 PARPBPQ9NWS1 579 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 FAM206AQ9NX38 181 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 GAR1Q9NY12 217 aaKnown RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 EHFQ9NZC4 300 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 MMACHCQ9Y4U1 282 aa6.84□□□□□ -1.31
CPSF7-216ENST00000536548 TMEM184BQ9Y519 407 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-216ENST00000536548 A0A087WWC5 75 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 hCG_1809904A0A1W2PP81 198 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 A0A1W2PR64 198 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 A0A1W2PRV1 198 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 CXorf65A6NEN9 183 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 SERPINE3A8MV23 424 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 TMEM150CB9EJG8 249 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 ALG1L2C9J202 215 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 C9JQL5 133 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 H0YIG0 161 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 K7EM74 188 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 NPIPB7O75200 414 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 TTRP02766 147 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 PRH1P02810 166 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 CLPSP04118 112 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 RPS2P15880 293 aaKnown RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 HNRNPA2B1P22626 353 aaKnown RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 AKT2P31751 481 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 THBS4P35443 961 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 AKR1C3P42330 323 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 SNU13P55769 128 aaKnown RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 TMEM33P57088 247 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 HSD11B2P80365 405 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF616Q08AN1 781 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 IL13RA2Q14627 380 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 HIST2H3PS2Q5TEC6 136 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 HEPN1Q6WQI6 88 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 FAM24BQ8N5W8 94 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 AVL9Q8NBF6 648 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 CCDC54Q8NEL0 328 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 OR13D1Q8NGV5 346 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 CCL4L1Q8NHW4 92 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 EDARADDQ8WWZ3 215 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 ASB10Q8WXI3 467 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 NANOS1Q8WY41 292 aaKnown RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 MAFIPQ8WZ33 124 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 TSACCQ96A04 125 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 CPNE4Q96A23 557 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 NTNG2Q96CW9 530 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 SLAMF6Q96DU3 332 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 ABHD17AQ96GS6 310 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 FOXN4Q96NZ1 517 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 OR11A1Q9GZK7 315 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 NXF5Q9H1B4 397 aaKnown RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 SIRT7Q9NRC8 400 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 KCNIP3Q9Y2W7 256 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 AMDHD2Q9Y303 409 aa6.83□□□□□ -1.32
CPSF7-216ENST00000536548 ANKHD1Q8IWZ3 2542 aaKnown RBP6.83□□□□□ -1.32
CPSF7-216ENST00000536548 ABCA2Q9BZC7 2435 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 POM121BA6NF01 834 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ZNF878C9JN71 531 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ADAM10O14672 748 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 LMX1BO60663 402 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 CRTAPO75718 401 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-216ENST00000536548 PIAS2O75928 621 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 HCKP08631 526 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ST6GAL1P15907 406 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 ITGA3P26006 1051 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 PTGER4P35408 488 aa6.82□□□□□ -1.32
CPSF7-216ENST00000536548 RPS10P46783 165 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms