RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ALKBH4Q9NXW9 302 aa13.98□□□□□ -0.17
MCF2L-232ENST00000535094 NCOR1O75376 2440 aa13.98□□□□□ -0.17
MCF2L-232ENST00000535094 CYB5BO43169 146 aa13.98□□□□□ -0.17
MCF2L-232ENST00000535094 HNRNPKP61978 463 aaKnown RBP eCLIP13.98□□□□□ -0.171e-6■■■■□ 19.3
MCF2L-232ENST00000535094 HMGN3Q15651 99 aa13.98□□□□□ -0.17
MCF2L-232ENST00000535094 ULBP2Q9BZM5 246 aa13.98□□□□□ -0.17
MCF2L-232ENST00000535094 METTL9Q9H1A3 318 aa13.98□□□□□ -0.17
MCF2L-232ENST00000535094 A0A1B0GX78 115 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 ZNF343Q6P1L6 599 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 C5orf46Q6UWT4 87 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 TMEM156Q8N614 296 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 NOXO1Q8NFA2 376 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 SLC35B3Q9H1N7 401 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 MMP17Q9ULZ9 603 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 LIPT2A6NK58 231 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 M0R135 149 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 VAX1Q5SQQ9 334 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 SLC25A43Q8WUT9 341 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-232ENST00000535094 ZNF799Q96GE5 643 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 PARP11Q9NR21 331 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 CACFD1Q9UGQ2 172 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 MCTS1Q9ULC4 181 aaKnown RBP13.97□□□□□ -0.17
MCF2L-232ENST00000535094 CLN5O75503 358 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 MBPP02686 304 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-232ENST00000535094 H2AFB1P0C5Y9 115 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 ACKR3P25106 362 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 HYAL1Q12794 435 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 PNLIPRP3Q17RR3 467 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-232ENST00000535094 ST8SIA1Q92185 356 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 SMIM8Q96KF7 97 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 LIPGQ9Y5X9 500 aa13.97□□□□□ -0.17
MCF2L-232ENST00000535094 HLA-HP01893 362 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 DUSP1P28562 367 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 ZNF84P51523 738 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 RAB11AP62491 216 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 FBXL14Q8N1E6 418 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 RHOVQ96L33 236 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 TMEM100Q9NV29 134 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 DNAJC13O75165 2243 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 NSG1A0A0A6YYJ2 146 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 RPL23AP62750 156 aaKnown RBP13.96□□□□□ -0.17
MCF2L-232ENST00000535094 AADACL3Q5VUY0 350 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 PLEKHA2Q9HB19 425 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 NECAP2Q9NVZ3 263 aa13.96□□□□□ -0.17
MCF2L-232ENST00000535094 ANKUB1A6NFN9 424 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 NDUFS6O75380 124 aaKnown RBP13.96□□□□□ -0.18
MCF2L-232ENST00000535094 TRAPPC6AO75865 159 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 ECH1Q13011 328 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 LINC00469Q8N7U9 141 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 OR52M1Q8NGK5 317 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 LMAN1LQ9HAT1 526 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 GNG13Q9P2W3 67 aa13.96□□□□□ -0.18
MCF2L-232ENST00000535094 F10P00742 488 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 MRPS34P82930 218 aaKnown RBP13.95□□□□□ -0.18
MCF2L-232ENST00000535094 LGI3Q8N145 548 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 PCDH15Q96QU1 1955 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 OR51B6Q9H340 312 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 KIAA2026Q5HYC2 2103 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 CNOT4O95628 575 aaKnown RBP13.95□□□□□ -0.18
MCF2L-232ENST00000535094 CTAG1AP78358 180 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 RUNX1Q01196 453 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 LCN15Q6UWW0 184 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 GJC3Q8NFK1 279 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 IL1F10Q8WWZ1 152 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 GNRHR2Q96P88 292 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 ABHD14AQ9BUJ0 271 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF581Q9P0T4 197 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 ANXA10Q9UJ72 324 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 NCOA6Q14686 2063 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-232ENST00000535094 IGKV1-9A0A0C4DH69 117 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 EPOPA6NHQ4 379 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 ZNF705GA8MUZ8 300 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-232ENST00000535094 SERPINE3A8MV23 424 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 PPP1R2P9O14990 202 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-232ENST00000535094 UBE2V2Q15819 145 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 PIGYQ3MUY2 71 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 GPR137CQ8N3F9 429 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 OR14L1PQ8NHC6 308 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 SPTSSAQ969W0 71 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 NIPSNAP3BQ9BS92 247 aa13.95□□□□□ -0.18
MCF2L-232ENST00000535094 H0YL77 283 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 NPIPB7O75200 414 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 DEDDO75618 318 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 FCGR3AP08637 254 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 ANOS1P23352 680 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 PLCXD3Q63HM9 321 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 GAR1Q9NY12 217 aaKnown RBP13.94□□□□□ -0.18
MCF2L-232ENST00000535094 DKKL1Q9UK85 242 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 LOC390937A0A1W2PQ73 354 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 DBX1A6NMT0 343 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 C5orf67F2Z3F1 127 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 HSD17B6O14756 317 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 FABP4P15090 132 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 NKAIN1Q4KMZ8 207 aa13.94□□□□□ -0.18
MCF2L-232ENST00000535094 BTNL8Q6UX41 500 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms