RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PRR13Q9NZ81 148 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 CEACAM18A8MTB9 384 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 CA11O75493 328 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 PRH1P02810 166 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 RND2P52198 227 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 SUPT4H1P63272 117 aaKnown RBP16.87■□□□□ 0.29
SMPD1-210ENST00000534405 TLE4Q04727 773 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 ZP2Q05996 745 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 NCR3LG1Q68D85 454 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 ZNF429Q86V71 674 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 VAX2Q9UIW0 290 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 MRPS18BQ9Y676 258 aaKnown RBP16.87■□□□□ 0.29
SMPD1-210ENST00000534405 ASXL3Q9C0F0 2248 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 IGHV1OR15-9A0A0B4J2B8 117 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 TMEM150CB9EJG8 249 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 RENP00797 406 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 SRP19P09132 144 aaKnown RBP16.86■□□□□ 0.29
SMPD1-210ENST00000534405 DNASE2BQ8WZ79 361 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 URM1Q9BTM9 101 aaKnown RBP16.86■□□□□ 0.29
SMPD1-210ENST00000534405 RBFOX3A6NFN3 312 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 C1QL1O75973 258 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 KLK2P20151 261 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 SERPINA2P20848 420 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 WDR38Q5JTN6 314 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 SLC35E3Q7Z769 313 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 PPP1R14AQ96A00 147 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 FAAP24Q9BTP7 215 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 CHST11Q9NPF2 352 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 RAB22AQ9UL26 194 aa16.86■□□□□ 0.29
SMPD1-210ENST00000534405 A0A1W2PPQ1 181 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 A0A1W2PR77 199 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 DEDDO75618 318 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 CHRM2P08172 466 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 CST2P09228 141 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 CDKN1BP46527 198 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 EGR3Q06889 387 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 SLC25A26Q70HW3 274 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 PRRX2Q99811 253 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 LRFN1Q9P244 771 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 BORCS7-ASMTA0A0B4J1R7 106 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 B4DEV8 164 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 SCAF4O95104 1147 aaKnown RBP16.85■□□□□ 0.29
SMPD1-210ENST00000534405 APOBEC1P41238 236 aaKnown RBP16.85■□□□□ 0.29
SMPD1-210ENST00000534405 TMEM225Q6GV28 225 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 SLC16A14Q7RTX9 510 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 C17orf82Q86X59 251 aaPredicted RBP16.85■□□□□ 0.29
SMPD1-210ENST00000534405 DTWD2Q8NBA8 298 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 APCDD1LQ8NCL9 501 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 OTOSQ8NHW6 89 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 ERGIC1Q969X5 290 aa16.85■□□□□ 0.29
SMPD1-210ENST00000534405 TRBV24-1A0A075B6N3 115 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 DHRS7CA6NNS2 312 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 HSPB2A8KAH6 182 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 TCF21O43680 179 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 BRS3P32247 399 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 P2RY1P47900 373 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 HSF1Q00613 529 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 HSPB2Q16082 182 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 OR4X1Q8NH49 305 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 OIT3Q8WWZ8 545 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 CMKLR1Q99788 373 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 NIPSNAP3BQ9BS92 247 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 TMEM242Q9NWH2 141 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 PADI1Q9ULC6 663 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 SIAH2O43255 324 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 NUDT14O95848 222 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 CD38P28907 300 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 MMP16P51512 607 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 KCNMB1Q16558 191 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 MEP1BQ16820 701 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 BTNL3Q6UXE8 466 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 NUP54Q7Z3B4 507 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 GALNTL5Q7Z4T8 443 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 NOXO1Q8NFA2 376 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 RNASE8Q8TDE3 154 aaKnown RBP16.84■□□□□ 0.29
SMPD1-210ENST00000534405 ELOVL3Q9HB03 270 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 SLC22A13Q9Y226 551 aa16.84■□□□□ 0.29
SMPD1-210ENST00000534405 K7N7A8 449 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 TSPAN2O60636 221 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 PNPP00491 289 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 GIMD1P0DJR0 217 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 IL12BP29460 328 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 RPL29P47914 159 aaKnown RBP16.83■□□□□ 0.28
SMPD1-210ENST00000534405 SLC6A8P48029 635 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 ACKR1Q16570 336 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 SYT13Q7L8C5 426 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 OR52N4Q8NGI2 321 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 CGGBP1Q9UFW8 167 aaPredicted RBP16.83■□□□□ 0.28
SMPD1-210ENST00000534405 B9D1Q9UPM9 204 aa16.83■□□□□ 0.28
SMPD1-210ENST00000534405 TRAV36DV7A0A075B6V5 113 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 A8MXE2 369 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 HLA-DQA2P01906 255 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 IL6RP08887 468 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-210ENST00000534405 FGF5P12034 268 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 TMEM11P17152 192 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 CD82P27701 267 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 FOXL2P58012 376 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 FDX2Q6P4F2 183 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 TSTD1Q8NFU3 115 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 MRPL22Q9NWU5 206 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms