RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 HSD11B1LQ7Z5J1 315 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 S100A7AQ86SG5 101 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 LRRC28Q86X40 367 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MARCH9Q86YJ5 346 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 BAP18Q8IXM2 172 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NRMQ8IXM6 262 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 DHRSXQ8N5I4 330 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ACBD7Q8N6N7 88 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF614Q8N883 585 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 C8orf31Q8N9H6 132 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM161BQ8NDZ6 487 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 OR6K3Q8NGY3 331 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CD200R1Q8TD46 325 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RXFP4Q8TDU9 374 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NPRL2Q8WTW4 380 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 GHSRQ92847 366 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NAT6Q93015 286 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NTNG2Q96CW9 530 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NUS1Q96E22 293 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MRPS24Q96EL2 167 aaKnown RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CPNE2Q96FN4 548 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ERMAPQ96PL5 475 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SUCNR1Q9BXA5 334 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ULBP1Q9BZM6 244 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM38AQ9H6F2 299 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 WDR55Q9H6Y2 383 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 LHX9Q9NQ69 397 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PRSS16Q9NQE7 514 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PAK5Q9P286 719 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ARMCX1Q9P291 453 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM181Q9P2C4 612 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TFR2Q9UP52 801 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MMP24Q9Y5R2 645 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PRSS21Q9Y6M0 314 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ACACBO00763 2458 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 A0A1B0GVI7 797 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TMEM218A2RU14 115 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 C5orf58C9J3I9 102 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SMLR1H3BR10 107 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RFXANKO14593 260 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TGOLN2O43493 480 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ORC5O43913 435 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ATP5LO75964 103 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 TSPAN13O95857 204 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MMP1P03956 469 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NMBP08949 121 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 H2BFMP0C1H6 154 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 FGF7P21781 194 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 P2RY2P41231 377 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MRPL19P49406 292 aaKnown RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 EFNA3P52797 238 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RAB10P61026 200 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MAXP61244 160 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF85Q03923 595 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF616Q08AN1 781 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PEA15Q15121 130 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RAB35Q15286 201 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RSU1Q15404 277 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CYBRD1Q53TN4 286 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SOHLH1Q5JUK2 328 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NCMAPQ5T1S8 102 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 C22orf42Q6IC83 251 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 APOBEC3HQ6NTF7 200 aaKnown RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 Q6ZSR9 355 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SSX6Q7RTT6 188 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 P2RY8Q86VZ1 359 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 LRRC52Q8N7C0 313 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 OR10W1Q8NGF6 305 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 OR2T6Q8NHC8 308 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 C11orf40Q8WZ69 217 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RCHY1Q96PM5 261 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 OR2V2Q96R30 315 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 FEM1AQ9BSK4 669 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MED10Q9BTT4 135 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ARV1Q9H2C2 271 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 SLC38A1Q9H2H9 487 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CDC42EP4Q9H3Q1 356 aaKnown RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 RHOFQ9HBH0 211 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ADGRL4Q9HBW9 690 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 C6orf50Q9HD87 102 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 OPTCQ9UBM4 332 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF223Q9UK11 482 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PDE10AQ9Y233 779 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ZFP30Q9Y2G7 519 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 AK6Q9Y3D8 172 aaKnown RBP2.88□□□□□ -1.95
CSMD3-210ENST00000534172 MTCH2Q9Y6C9 303 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 PLXNA1Q9UIW2 1896 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 ZFHX4Q86UP3 3567 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 NOTCH4Q99466 2003 aa2.88□□□□□ -1.95
CSMD3-210ENST00000534172 CLDN24A6NM45 220 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 GJE1A6NN92 205 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 B4DXG7 233 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 DISC1C4P0D8 188 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 K7EQD1 137 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 RAB29O14966 203 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CYB5BO43169 146 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF749O43361 778 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 TYROBPO43914 113 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 CHST1O43916 411 aa2.87□□□□□ -1.95
CSMD3-210ENST00000534172 AQP8O94778 261 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms