RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 VDAC2P45880 294 aaPredicted RBP17.14■□□□□ 0.33
SSH3-211ENST00000534112 DYNLT3P51808 116 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 RPS7P62081 194 aaKnown RBP17.14■□□□□ 0.33
SSH3-211ENST00000534112 CD83Q01151 205 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 TMEM95Q3KNT9 176 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 FAM98BQ52LJ0 330 aaKnown RBP17.14■□□□□ 0.33
SSH3-211ENST00000534112 SLC35D3Q5M8T2 416 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 KCTD18Q6PI47 426 aaPredicted RBP17.14■□□□□ 0.33
SSH3-211ENST00000534112 BATF2Q8N1L9 274 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 MROQ9BYG7 248 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 YIPF3Q9GZM5 350 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 HES4Q9HCC6 221 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 POLDIP2Q9Y2S7 368 aa17.14■□□□□ 0.33
SSH3-211ENST00000534112 TENM3Q9P273 2699 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 MEX3AA1L020 520 aaKnown RBP17.13■□□□□ 0.33
SSH3-211ENST00000534112 K7EIL1 84 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 K7N7A8 449 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 ALDOBP05062 364 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 ZNF728P0DKX0 622 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 SLC2A5P22732 501 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 DHFR2Q86XF0 187 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 OR5AU1Q8NGC0 362 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 OCSTAMPQ9BR26 566 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 DNAH9Q9NYC9 4486 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 COL7A1Q02388 2944 aa17.13■□□□□ 0.33
SSH3-211ENST00000534112 PQLC2LA1A4F0 135 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 ARRDC5A6NEK1 342 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 F2RL2O00254 374 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 DHRS3O75911 302 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 RBP4P02753 201 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 IGHV1-8P0DP01 117 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 JUNBP17275 347 aaPredicted RBP17.12■□□□□ 0.33
SSH3-211ENST00000534112 OR12D2P58182 307 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
SSH3-211ENST00000534112 GK3PQ14409 553 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 CLVS2Q5SYC1 327 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 LCN1P1Q5VSP4 162 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 TMEM42Q69YG0 159 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 MUC13Q9H3R2 512 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 GPR173Q9NS66 373 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 NUFIP1Q9UHK0 495 aaKnown RBP17.12■□□□□ 0.33
SSH3-211ENST00000534112 HILPDAQ9Y5L2 63 aa17.12■□□□□ 0.33
SSH3-211ENST00000534112 PRR32B1ATL7 298 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ZNF254O75437 659 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 PF4V1P10720 104 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ERVK11-1P61568 191 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 CDK5Q00535 292 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 MS4A2Q01362 244 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ROM1Q03395 351 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 COL10A1Q03692 680 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 C11orf87Q6NUJ2 197 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ASRGL1Q7L266 308 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ZNF679Q8IYX0 411 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ARHGAP24Q8N264 748 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 ASCC1Q8N9N2 400 aaKnown RBP17.11■□□□□ 0.33
SSH3-211ENST00000534112 SLC22A13Q9Y226 551 aa17.11■□□□□ 0.33
SSH3-211ENST00000534112 DLGAP1O14490 977 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 ZNF737O75373 536 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 TTRP02766 147 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 MPZP25189 248 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 EDDM3BP56851 147 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 SLC34A1Q06495 639 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 MFGE8Q08431 387 aaPredicted RBP17.1■□□□□ 0.33
SSH3-211ENST00000534112 APOFQ13790 326 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 ZNF829Q3KNS6 432 aaPredicted RBP17.1■□□□□ 0.33
SSH3-211ENST00000534112 ANGPTL5Q86XS5 388 aa17.1■□□□□ 0.33
SSH3-211ENST00000534112 FAM90A22PA8MWA6 464 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 CST1P01037 141 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 MRPL3P09001 348 aaKnown RBP17.09■□□□□ 0.33
SSH3-211ENST00000534112 RAP2AP10114 183 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 OSMP13725 252 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 RIDAP52758 137 aaKnown RBP17.09■□□□□ 0.33
SSH3-211ENST00000534112 ESRRGP62508 458 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 TRIM25Q14258 630 aaKnown RBP17.09■□□□□ 0.33
SSH3-211ENST00000534112 DEFB121Q5J5C9 76 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 TCTEX1D4Q5JR98 221 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 MINOS1Q5TGZ0 78 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 GDPD3Q7L5L3 318 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 TMEM179BQ7Z7N9 219 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 ASB17Q8WXJ9 295 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 SLC7A6OSQ96CW6 309 aaPredicted RBP17.09■□□□□ 0.33
SSH3-211ENST00000534112 CHID1Q9BWS9 393 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 COPS3Q9UNS2 423 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 MINOS1-NBL1R4GNA1 71 aa17.09■□□□□ 0.33
SSH3-211ENST00000534112 CHRM2P08172 466 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 AZGP1P25311 298 aaKnown RBP17.08■□□□□ 0.32
SSH3-211ENST00000534112 KRTAP10-11P60412 298 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 ACTA2P62736 377 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 ACTG2P63267 376 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 ACTC1P68032 377 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 ACTA1P68133 377 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 SLC35A2P78381 396 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 BNIP1Q12981 228 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 CCDC121Q6ZUS5 278 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 TCF23Q7RTU1 214 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 CENPVQ7Z7K6 275 aaPredicted RBP17.08■□□□□ 0.32
SSH3-211ENST00000534112 ZNF714Q96N38 554 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 TTTY10Q9BZA0 68 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 IKZF2Q9UKS7 526 aa17.08■□□□□ 0.32
SSH3-211ENST00000534112 TMEM14AQ9Y6G1 99 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms