RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ADGRG7Q96K78 797 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 C1QAP02745 245 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 PCBP3P57721 371 aaKnown RBP13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 PTPMT1Q8WUK0 201 aaPredicted RBP13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 DBX1A6NMT0 343 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 CELA2AP08217 269 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 FGF2P09038 288 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 GALP22466 123 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 CDK5Q00535 292 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 DPF1Q92782 380 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 ADTRPQ96IZ2 230 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 MASP2O00187 686 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 CEACAM6P40199 344 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 TUSC5Q8IXB3 177 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 TMEM123Q8N131 208 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF416Q9BWM5 594 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 KRASP01116 189 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 PNLIPP16233 465 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 SCAND1P57086 179 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 GAB4Q2WGN9 574 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 BAP18Q8IXM2 172 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF230Q9UIE0 474 aaPredicted RBP13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 PDCD6O75340 191 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 WNT1P04628 370 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 FGF7P21781 194 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 FCARP24071 287 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF239Q16600 458 aaKnown RBP13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 H3F3CQ6NXT2 135 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 MAMSTRQ6ZN01 415 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 TVP23CQ96ET8 276 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 IL36GQ9NZH8 169 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 B4E171 279 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 DCTDP32321 178 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 TSPAN7P41732 249 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 OR8B3Q8NGG8 313 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 OR8B2Q96RD0 313 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 MS4A5Q9H3V2 200 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 UBTD1Q9HAC8 227 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 SLC35D1Q9NTN3 355 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 H0Y8G0 127 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 RBP4P02753 201 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 FPR2P25090 351 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 MMP15P51511 669 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 HAGHQ16775 308 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 TMEM147Q9BVK8 224 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 IGHV3-7P01780 117 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 SLC25A4P12235 298 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 COX7A1P24310 79 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 Q6ZNX1 250 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 ZAR1Q86SH2 424 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 C10orf90Q96M02 699 aa13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 TMEFF2Q9UIK5 374 aaPredicted RBP13.11□□□□□ -0.31
PCDHA9-202ENST00000532602 SPTA1P02549 2419 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 TGOLN2O43493 480 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 OR4A8P0C604 315 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 PGA3P0DJD8 388 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 PCMT1P22061 227 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 DCAF10Q5QP82 559 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 ZFP62Q8NB50 900 aaPredicted RBP13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 MED30Q96HR3 178 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 TMPRSS13Q9BYE2 586 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 SLC25A32Q9H2D1 315 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 SERTM2A0A1B0GWG4 89 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 SNCGO76070 127 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 AQP8O94778 261 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 CD37P11049 281 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 OR4F17Q8NGA8 305 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNRF4Q8WWF5 429 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 PTP4A1Q93096 173 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 C1RLQ9NZP8 487 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 PSG11Q9UQ72 335 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 TIPARPQ7Z3E1 657 aaKnown RBP13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 FGF11Q92914 225 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 FAM122AQ96E09 287 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF629Q9UEG4 869 aaPredicted RBP13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 DTX4Q9Y2E6 619 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 TUBAL3A6NHL2 446 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 CDC42EP2O14613 210 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 FCGR3BO75015 233 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF205O95201 554 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 CD300LDQ6UXZ3 194 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 RFESDQ8TAC1 157 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 YIPF6Q96EC8 236 aa13.1□□□□□ -0.31
PCDHA9-202ENST00000532602 ERRFI1Q9UJM3 462 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms