RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 LPAR6P43657 344 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 KLF3P57682 345 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 TPPP2P59282 170 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 HES3Q5TGS1 186 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 TMEM108Q6UXF1 575 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 RELL2Q8NC24 303 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 NUDT16L1Q9BRJ7 211 aaKnown RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 UQCC1Q9NVA1 299 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PCOLCE2Q9UKZ9 415 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 RBBP6Q7Z6E9 1792 aaKnown RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 CITO14578 2027 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 hADV38S2A0JD32 116 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 C9orf170A2RU37 121 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 RER1O15258 196 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 DRD3P35462 400 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 ZBTB37Q5TC79 503 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 MRM1Q6IN84 353 aaKnown RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 C20orf196Q8IYI0 205 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 TMEM18Q96B42 140 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 SLC45A2Q9UMX9 530 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 POMT1Q9Y6A1 747 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 CT62P0C5K7 136 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 ACSM4P0C7M7 580 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 ZNF32P17041 273 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 MLF1P58340 268 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 FFAR4Q5NUL3 377 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 FAM27D1Q5T7N8 215 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 LSMEM1Q8N8F7 131 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 ANGPTL6Q8NI99 470 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PECRQ9BY49 303 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 RHOFQ9HBH0 211 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 STRCP1A6NGW2 1772 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 RGPD3A6NKT7 1758 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PDCD6O75340 191 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PCMT1P22061 227 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 CEACAM3P40198 252 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PMP22Q01453 160 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 PWWP2BQ6NUJ5 590 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 VN1R4Q7Z5H5 301 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 RPEQ96AT9 228 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 CABLES2Q9BTV7 478 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 TMEM147Q9BVK8 224 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 LHX9Q9NQ69 397 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 OR6C3Q9NZP0 311 aa7.55□□□□□ -1.2
CTNND1-219ENST00000528621 DEFB108AA8MXU0 73 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 M0R296 226 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 PPIHO43447 177 aaKnown RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 WNT1P04628 370 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 RAC3P60763 192 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 PRR27Q6MZM9 219 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ADAM5Q6NVV9 412 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 C1orf174Q8IYL3 243 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 C17orf47Q8NEP4 570 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 OR4F17Q8NGA8 305 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 CA5BP1Q8WTZ4 195 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 WDR54Q9H977 334 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 EVPLQ92817 2033 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 RNASEK-C17orf49H0YIS7 233 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 FCGR3BO75015 233 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ANKRD34CP0C6C1 535 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 OPRK1P41145 380 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 CDKN2AP42771 156 aaKnown RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 MYPOPQ86VE0 399 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 RPS4Y2Q8TD47 263 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 GRAMD2BQ96HH9 432 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 RAB1BQ9H0U4 201 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 OR5V1Q9UGF6 321 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 CES1P1Q9UKY3 287 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ICAM5Q9UMF0 924 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 A0A1W2PN81 502 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 TMEM210A6NLX4 147 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 AKR7A2O43488 359 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 CTSDP07339 412 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 CHRNA7P36544 502 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 FAAP24Q9BTP7 215 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ARFGEF1Q9Y6D6 1849 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ZNF320A2RRD8 509 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 OOEPA6NGQ2 149 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 HMSDA8MTL9 139 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 TO15178 435 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 DNPH1O43598 174 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 PRSS23O95084 383 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 CPN1P15169 458 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 DMKNQ6E0U4 476 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ZNF429Q86V71 674 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 ZNF547Q8IVP9 402 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 PTP4A1Q93096 173 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 LPAR3Q9UBY5 353 aa7.54□□□□□ -1.2
CTNND1-219ENST00000528621 PSG11Q9UQ72 335 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms