RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 NRASP01111 189 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 CDK1P06493 297 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 MRPL3P09001 348 aaKnown RBP11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L2P0CJ85 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L3P0CJ86 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L4P0CJ87 422 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L5P0CJ88 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L6P0CJ89 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L7P0CJ90 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 OMGP23515 440 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 HTR1FP30939 366 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 UBE2E1P51965 193 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 EGR3Q06889 387 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 RAB40BQ12829 278 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 SMN1Q16637 294 aaKnown RBP11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DGUOKQ16854 277 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF684Q5T5D7 378 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4L9Q6RFH8 374 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF322Q6U7Q0 402 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-212ENST00000527887 TREML4Q6UXN2 200 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 MOB3CQ70IA8 216 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 FGFRL1Q8N441 504 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 Q8N7P7 452 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 OR5D13Q8NGL4 314 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 AQP3Q92482 292 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 H1FXQ92522 213 aaKnown RBP11.66□□□□□ -0.54
CAPN1-212ENST00000527887 GGHQ92820 318 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 TNFRSF19Q9NS68 423 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 PAK1IP1Q9NWT1 392 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-212ENST00000527887 DUX4Q9UBX2 424 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 IKZF2Q9UKS7 526 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 PIGLQ9Y2B2 252 aa11.66□□□□□ -0.54
CAPN1-212ENST00000527887 A0A1W2PPH5 198 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 DPPA5A6NC42 116 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF670-ZNF695F2Z2N8 137 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 LOC110117498-PIK3R3F6TDL0 507 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 PSMD9O00233 223 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 NPFFO15130 113 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 GPR137BO60478 399 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 NOS1APO75052 506 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-212ENST00000527887 RHBDL1O75783 438 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 HTR1AP08908 422 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 DBTP11182 482 aaKnown RBP11.65□□□□□ -0.54
CAPN1-212ENST00000527887 PSG2P11465 335 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 NDUFB7P17568 137 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 DCKP27707 260 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 GABRA2P47869 451 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 GMFBP60983 142 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 RELBQ01201 579 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 TBCEQ15813 527 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-212ENST00000527887 CEP78Q5JTW2 689 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 CLVS2Q5SYC1 327 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 PLCXD3Q63HM9 321 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 TMEM42Q69YG0 159 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 Q6ZSR3 168 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 EGFL6Q8IUX8 553 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 SLC35F2Q8IXU6 374 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 ELMOD2Q8IZ81 293 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 OR5R1Q8NH85 324 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 TNFRSF14Q92956 283 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 JAM3Q9BX67 310 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 FGF20Q9NP95 211 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-212ENST00000527887 WARS2Q9UGM6 360 aaKnown RBP11.65□□□□□ -0.54
CAPN1-212ENST00000527887 ZNF222Q9UK12 451 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 COPS3Q9UNS2 423 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 SF3B6Q9Y3B4 125 aaKnown RBP11.65□□□□□ -0.54
CAPN1-212ENST00000527887 R4GMQ9 66 aa11.65□□□□□ -0.54
CAPN1-212ENST00000527887 A0A1W2PQ09 198 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 RNASEK-C17orf49H0YIS7 233 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 ZNF701M0R085 212 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 SRSF10O75494 262 aaKnown RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 FADS2O95864 444 aaKnown RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 IGHV4-59P01825 116 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 TTRP02766 147 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 EMX1Q04741 257 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 ZNF91Q05481 1191 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 ST3GAL4Q11206 333 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 IRF3Q14653 427 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 BCL2L15Q5TBC7 163 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 HAGHLQ6PII5 290 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 STX19Q8N4C7 294 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 ZSCAN4Q8NAM6 433 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 POC1AQ8NBT0 407 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 CCDC54Q8NEL0 328 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 DGCR14Q96DF8 476 aaKnown RBP11.64□□□□□ -0.55
CAPN1-212ENST00000527887 TMEM80Q96HE8 168 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 CITED1Q99966 193 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 ADGRL4Q9HBW9 690 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 SIRT7Q9NRC8 400 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 OR52A1Q9UKL2 312 aa11.64□□□□□ -0.55
CAPN1-212ENST00000527887 DIMT1Q9UNQ2 313 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms