RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 C12orf43Q96C57 262 aaKnown RBP13.9□□□□□ -0.18
SMCO4-204ENST00000527149 NKX3-1Q99801 234 aaPredicted RBP13.9□□□□□ -0.18
SMCO4-204ENST00000527149 SMR3AQ99954 134 aa13.9□□□□□ -0.18
SMCO4-204ENST00000527149 ZNF665Q9H7R5 613 aa13.9□□□□□ -0.18
SMCO4-204ENST00000527149 PATZ1Q9HBE1 687 aaKnown RBP13.9□□□□□ -0.18
SMCO4-204ENST00000527149 FN1P02751 2386 aaKnown RBP13.9□□□□□ -0.18
SMCO4-204ENST00000527149 TRAV38-1A0A0B4J264 116 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 SPRY1O43609 319 aaPredicted RBP13.89□□□□□ -0.19
SMCO4-204ENST00000527149 FCN3O75636 299 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 PLATP00750 562 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 HCKP08631 526 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 BDKRB2P30411 391 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 POU3F4P49335 361 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 GMFBP60983 142 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 SEC61A1P61619 476 aaKnown RBP13.89□□□□□ -0.19
SMCO4-204ENST00000527149 DDI2Q5TDH0 399 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 LYPD2Q6UXB3 125 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 ACP7Q6ZNF0 438 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 CEACAM19Q7Z692 300 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 LRRTM1Q86UE6 522 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 SLAMF9Q96A28 289 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 CTSZQ9UBR2 303 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 CKLFQ9UBR5 152 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 ZNF222Q9UK12 451 aa13.89□□□□□ -0.19
SMCO4-204ENST00000527149 A0A1B0GW55 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 ANGPTL7O43827 346 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 WNT2P09544 360 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 OCMP0CE72 109 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L2P0CJ85 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L3P0CJ86 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L4P0CJ87 422 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L5P0CJ88 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L6P0CJ89 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L7P0CJ90 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-204ENST00000527149 GLRA1P23415 457 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 NPBWR2P48146 333 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 MICBQ29980 383 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4L9Q6RFH8 374 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-204ENST00000527149 BATF2Q8N1L9 274 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 ZSCAN4Q8NAM6 433 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-204ENST00000527149 ANGPTL6Q8NI99 470 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 PHYHIPQ92561 330 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 RAB39BQ96DA2 213 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 MSI2Q96DH6 328 aaKnown RBP13.88□□□□□ -0.19
SMCO4-204ENST00000527149 CEP19Q96LK0 163 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 NEK6Q9HC98 313 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 SNTG1Q9NSN8 517 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 DUX4Q9UBX2 424 aa13.88□□□□□ -0.19
SMCO4-204ENST00000527149 IGKV1D-17A0A075B6S4 117 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 TRDV1A0A1B0GX56 115 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 KIAA1324LA8MWY0 1029 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-204ENST00000527149 A8MXK9 166 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 GYPAP02724 150 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 TFF1P04155 84 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 CD37P11049 281 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 GALP22466 123 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 OR3A4PP47883 348 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 GZMKP49863 264 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 SMIM21Q3B7S5 101 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 HSD17B12Q53GQ0 312 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 ASCL4Q6XD76 172 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 ZNF841Q6ZN19 808 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 C1QL2Q7Z5L3 287 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 BIVMQ86UB2 503 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 SAXO1Q8IYX7 474 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 RBFOX1Q9NWB1 397 aaKnown RBP13.87□□□□□ -0.19
SMCO4-204ENST00000527149 RASL12Q9NYN1 266 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 NLKQ9UBE8 527 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 IL36RNQ9UBH0 155 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 KAAG1Q9UBP8 84 aa13.87□□□□□ -0.19
SMCO4-204ENST00000527149 NIPBLQ6KC79 2804 aaeCLIP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 SHISA3A0PJX4 238 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 OR2AT4A6NND4 320 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 KDM4BO94953 1096 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 NXPH2O95156 264 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 SFTPBP07988 381 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 PSG2P11465 335 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 RPS2P15880 293 aaKnown RBP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 ZNF16P17020 682 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 BCL3P20749 454 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 CPT2P23786 658 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 ZNF93P35789 620 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 KCNJ8Q15842 424 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 ATPAF1Q5TC12 328 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 ZNF788Q6ZQV5 615 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 CDH26Q8IXH8 852 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 MKXQ8IYA7 352 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 NKAIN3Q8N8D7 197 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 PXT1Q8NFP0 134 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 OR5T2Q8NGG2 359 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 OR51F2Q8NH61 342 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 TMIGD2Q96BF3 282 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 CPNE2Q96FN4 548 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 C1orf147Q96MC9 270 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-204ENST00000527149 GFI1Q99684 422 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 SMURF1Q9HCE7 757 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 DNAJB11Q9UBS4 358 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 MIOXQ9UGB7 285 aa13.86□□□□□ -0.19
SMCO4-204ENST00000527149 SETD2Q9BYW2 2564 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms