RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TRBV23-1A0A0A0MS06 115 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 MEX3AA1L020 520 aaKnown RBP11.49□□□□□ -0.57
CPSF1-201ENST00000526271 RFPL4AA6NLU0 287 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 ANXA2P2A6NMY6 339 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 ODF3BA8MYP8 253 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 ZNF732B4DXR9 585 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 RFPL4AL1F8VTS6 287 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 H0YAE9 185 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 SLC16A6O15403 523 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 FBXO24O75426 580 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 KRTAP10-11P60412 298 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 PSMA6P60900 246 aaKnown RBP11.49□□□□□ -0.57
CPSF1-201ENST00000526271 BLCAPP62952 87 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 SLX4IPQ5VYV7 408 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 C12orf73Q69YU5 71 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 C11orf88Q6PI97 169 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 ZNF782Q6ZMW2 699 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-201ENST00000526271 KCTD8Q6ZWB6 473 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 BATF2Q8N1L9 274 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 OR4M1Q8NGD0 313 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 HRASLS5Q96KN8 279 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 NKX3-1Q99801 234 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-201ENST00000526271 RIBC2Q9H4K1 309 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 FAM118AQ9NWS6 357 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 TCF19Q9Y242 345 aa11.49□□□□□ -0.57
CPSF1-201ENST00000526271 H2BFMP0C1H6 154 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 IGLL1P15814 213 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 SLC2A5P22732 501 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 CFL1P23528 166 aaKnown RBP11.48□□□□□ -0.57
CPSF1-201ENST00000526271 CEACAM21Q3KPI0 293 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 HAGHLQ6PII5 290 aaPredicted RBP11.48□□□□□ -0.57
CPSF1-201ENST00000526271 THAP5Q7Z6K1 395 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 WFDC9Q8NEX5 89 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 OR5M11Q96RB7 305 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 OCSTAMPQ9BR26 566 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 OR51V1Q9H2C8 321 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 VCX3BQ9H321 246 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 LRP12Q9Y561 859 aa11.48□□□□□ -0.57
CPSF1-201ENST00000526271 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 F8VVB4 439 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 F8VWA3 439 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 PSMD9O00233 223 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 ALOX5APP20292 161 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 GNG3P63215 75 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 ADARB1P78563 741 aaKnown RBP11.47□□□□□ -0.57
CPSF1-201ENST00000526271 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 TEX12Q9BXU0 123 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 FAM234AQ9H0X4 552 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 VCXQ9H320 206 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 HES4Q9HCC6 221 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 TVP23BQ9NYZ1 205 aa11.47□□□□□ -0.57
CPSF1-201ENST00000526271 WI2-2373I1.2A0A1W2PRP0 233 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 RIIAD1A6NNX1 92 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 C17orf98A8MV24 154 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 SRSF10O75494 262 aaKnown RBP11.46□□□□□ -0.57
CPSF1-201ENST00000526271 IFNGP01579 166 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 LYNP07948 512 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 PGA5P0DJD9 388 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 VSIG8P0DPA2 414 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 FAHP16930 419 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 ZNF3P17036 446 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 VHLP40337 213 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 BLVRAP53004 296 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 RPL31P62899 125 aaKnown RBP11.46□□□□□ -0.57
CPSF1-201ENST00000526271 CD83Q01151 205 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 MFGE8Q08431 387 aaPredicted RBP11.46□□□□□ -0.57
CPSF1-201ENST00000526271 BLMHQ13867 455 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 SNAPC1Q16533 368 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 PLBD1Q6P4A8 553 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 C10orf99Q6UWK7 81 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 SHFQ7M4L6 423 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 DHRSXQ8N5I4 330 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 THEM6Q8WUY1 208 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 TRUB1Q8WWH5 349 aaKnown RBP11.46□□□□□ -0.57
CPSF1-201ENST00000526271 SGCDQ92629 289 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 TEAD3Q99594 435 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 COPS3Q9UNS2 423 aa11.46□□□□□ -0.57
CPSF1-201ENST00000526271 STAB2Q8WWQ8 2551 aa11.46□□□□□ -0.58
CPSF1-201ENST00000526271 SACSQ9NZJ4 4579 aa11.46□□□□□ -0.58
CPSF1-201ENST00000526271 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.58
CPSF1-201ENST00000526271 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 XPNPEP2O43895 674 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 PRKYO43930 277 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 ZNF737O75373 536 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 MPIG6BO95866 241 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 APOC1P02654 83 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 PIPP12273 146 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-201ENST00000526271 PRDX2P32119 198 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 AQP4P55087 323 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 ERVK11-1P61568 191 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 CNN3Q15417 329 aaKnown RBP11.45□□□□□ -0.58
CPSF1-201ENST00000526271 SNCBQ16143 134 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 TTC23Q5W5X9 447 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms