RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 DISC1C4P0D8 188 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 SLC16A7O60669 478 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 RAD1O60671 282 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 DCTN3O75935 186 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 AQP8O94778 261 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 GCGP01275 180 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 RLN2P04090 185 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 RNF224P0DH78 156 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 CD1DP15813 335 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ZNF17P17021 662 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 TBPP20226 339 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 GDF1P27539 372 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 MPIP34949 423 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ACOT2P49753 483 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 PPOXP50336 477 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 HNRNPA3P51991 378 aaKnown RBP3.76□□□□□ -1.81
CD44-220ENST00000525688 RAB8AP61006 207 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 SRPXP78539 464 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 GTF2BQ00403 316 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 FLI1Q01543 452 aaPredicted RBP3.76□□□□□ -1.81
CD44-220ENST00000525688 SEMG2Q02383 582 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 POU6F1Q14863 301 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 MAPK14Q16539 360 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ECSCRQ19T08 205 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 VAX1Q5SQQ9 334 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 FAM182AQ5T1J6 154 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 WDR25Q64LD2 544 aaPredicted RBP3.76□□□□□ -1.81
CD44-220ENST00000525688 Q6ZTC4 211 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ZNF720Q7Z2F6 126 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 CEACAM19Q7Z692 300 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 NRMQ8IXM6 262 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 OR6V1Q8N148 313 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 MTURNQ8N3F0 131 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 Q8NBF4 154 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ZNRF1Q8ND25 227 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 OR2T33Q8NG76 320 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 OR6K3Q8NGY3 331 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 DOK4Q8TEW6 326 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 SSC4DQ8WTU2 575 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 CASTOR1Q8WTX7 329 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 TCTEX1D2Q8WW35 142 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 RASSF5Q8WWW0 418 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 MAFIPQ8WZ33 124 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 RASL10AQ92737 203 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 BORCS5Q969J3 196 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 OR2V2Q96R30 315 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 SORT1Q99523 831 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 TMEM208Q9BTX3 173 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 UGT2B28Q9BY64 529 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 CHIAQ9BZP6 476 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 CXCL16Q9H2A7 254 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 PPDPFQ9H3Y8 114 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 MOB1AQ9H8S9 216 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 UGT1A7Q9HAW7 530 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ACOT13Q9NPJ3 140 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ESM1Q9NQ30 184 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 GIN1Q9NXP7 522 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 NUDT4Q9NZJ9 180 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 ZNF391Q9UJN7 358 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 SAMD4AQ9UPU9 718 aaKnown RBP3.76□□□□□ -1.81
CD44-220ENST00000525688 NDUFAF1Q9Y375 327 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 CPQQ9Y646 472 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 KIAA1671Q9BY89 1806 aa3.76□□□□□ -1.81
CD44-220ENST00000525688 NCOR1O75376 2440 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 A0A1W2PQ67 120 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 EFCAB9A8MZ26 197 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 EPM2AB3EWF7 344 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ANKRD63C9JTQ0 380 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 AZIN1O14977 448 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ZNF749O43361 778 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 PI15O43692 258 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 FAM189A1O60320 539 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 IFNA21P01568 189 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 TYMSP04818 313 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CRHP06850 196 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CTSLP07711 333 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CT45A6P0DMU7 189 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CT45A5P0DMU8 189 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CT45A7P0DMV0 189 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 PVRP15151 417 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 SERPINA2P20848 420 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 HTR1DP28221 377 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 SHMT2P34897 504 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CEACAM6P40199 344 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 PTGDSP41222 190 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ELK3P41970 407 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CRYBA4P53673 196 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 TRAM1Q15629 374 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 TTLL9Q3SXZ7 439 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 TCEAL5Q5H9L2 206 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CT45A1Q5HYN5 189 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 MUC21Q5SSG8 566 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ALKAL1Q6UXT8 129 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 NPSR1Q6W5P4 371 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 GDPD3Q7L5L3 318 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 DPPA2Q7Z7J5 298 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 THOC6Q86W42 341 aaKnown RBP3.75□□□□□ -1.81
CD44-220ENST00000525688 CT45A3Q8NHU0 189 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 SPATA3Q8NHX4 192 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 TMEM56Q96MV1 263 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms