RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LYSTQ99698 3801 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 TSSK6Q9BXA6 273 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 CLEC7AQ9BXN2 247 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 RGCCQ9H4X1 137 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 LIN7BQ9HAP6 207 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 GPR173Q9NS66 373 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 VNN3Q9NY84 501 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 RASL12Q9NYN1 266 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 SLC22A13Q9Y226 551 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 CDH10Q9Y6N8 788 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 CSMD3Q7Z407 3707 aa9.22□□□□□ -0.93
SDCBP-211ENST00000523441 A6NIN4 97 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 SERPINE3A8MV23 424 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 FAM90A22PA8MWA6 464 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 SEC14L6B5MCN3 397 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 GSC2O15499 205 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 SELENOFO60613 162 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 MMP23AO75900 390 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
SDCBP-211ENST00000523441 AMY1AP04745 511 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 AMY2AP04746 511 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 PGA5P0DJD9 388 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 GSTT1P30711 240 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 OR3A4PP47883 348 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 SMIM11AP58511 58 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 IL18R1Q13478 541 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 RBM39Q14498 530 aaKnown RBP9.21□□□□□ -0.94
SDCBP-211ENST00000523441 TEX30Q5JUR7 227 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 CALHM1Q8IU99 346 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 OR4Q3Q8NH05 313 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 STON2Q8WXE9 905 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 RAX2Q96IS3 184 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 ATP6V1G3Q96LB4 118 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 DHRS1Q96LJ7 313 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 RBM14Q96PK6 669 aaKnown RBP9.21□□□□□ -0.94
SDCBP-211ENST00000523441 P2RX4Q99571 388 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 TTTY10Q9BZA0 68 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 CHST6Q9GZX3 395 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 OR51V1Q9H2C8 321 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 TMEM133Q9H2Q1 129 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 NIPAL2Q9H841 368 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 PAPOLBQ9NRJ5 636 aaKnown RBP9.21□□□□□ -0.94
SDCBP-211ENST00000523441 ARMC1Q9NVT9 282 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 GTF2A1LQ9UNN4 478 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 PIGLQ9Y2B2 252 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 AP3M1Q9Y2T2 418 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 SESN1Q9Y6P5 492 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.94
SDCBP-211ENST00000523441 OR5B21A6NL26 309 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 CCL24O00175 119 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 SASH3O75995 380 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 OR2F2O95006 317 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 LYNP07948 512 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 SNU13P55769 128 aaKnown RBP9.2□□□□□ -0.94
SDCBP-211ENST00000523441 PPP1R8Q12972 351 aaKnown RBP9.2□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF684Q5T5D7 378 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 C9orf66Q5T8R8 295 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 PRAMEF5Q5TYX0 476 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 TCF23Q7RTU1 214 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 C16orf82Q7Z2V1 217 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 ANGPTL5Q86XS5 388 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF695Q8IW36 515 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 OR5A2Q8NGI9 324 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 OR4P4Q8NGL7 312 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 SAMD4AQ9UPU9 718 aaKnown RBP9.2□□□□□ -0.94
SDCBP-211ENST00000523441 KLHDC2Q9Y2U9 406 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 LYVE1Q9Y5Y7 322 aa9.2□□□□□ -0.94
SDCBP-211ENST00000523441 RIIAD1A6NNX1 92 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 H3BSH0 61 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 J3QT63 122 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 K7N7A8 449 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 GMNNO75496 209 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 NRASP01111 189 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 IFNGP01579 166 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 CALCBP10092 127 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 H2AFXP16104 143 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-211ENST00000523441 GABRR1P24046 479 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 HCCSP53701 268 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 HNF4GQ14541 408 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF260Q3ZCT1 412 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 SAMD4BQ5PRF9 694 aaKnown RBP9.19□□□□□ -0.94
SDCBP-211ENST00000523441 LINC01590Q5TEZ4 76 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 PLBD1Q6P4A8 553 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 SHFQ7M4L6 423 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 IQCF1Q8N6M8 205 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 OR5M8Q8NGP6 311 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 OR51E1Q8TCB6 317 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 MCUR1Q96AQ8 359 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 SIKE1Q9BRV8 207 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 NMNAT2Q9BZQ4 307 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 VIPAS39Q9H9C1 493 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 GPR84Q9NQS5 396 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 DCAF13Q9NV06 445 aaKnown RBP9.19□□□□□ -0.94
SDCBP-211ENST00000523441 ING3Q9NXR8 418 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 DPM3Q9P2X0 92 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 CD300AQ9UGN4 299 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF256Q9Y2P7 627 aaPredicted RBP9.19□□□□□ -0.94
SDCBP-211ENST00000523441 SMAD5-AS1Q9Y6J3 95 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms