RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	ANXA8	P13928	327 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	PRKACG	P22612	351 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	EEF1B2	P24534	225 aa	Known RBP	5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	FAS	P25445	335 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	EVX1	P49640	407 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	ALDH3A2	P51648	485 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	EFNA4	P52798	201 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	UCP2	P55851	309 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	GLO1	Q04760	184 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	SCRN3	Q0VDG4	424 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	AQP6	Q13520	282 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	ATP6AP1	Q15904	470 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	CLEC12B	Q2HXU8	276 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	TMEM30B	Q3MIR4	351 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLC36A3	Q495N2	470 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	OTP	Q5XKR4	325 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF774	Q6NX45	483 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	SHQ1	Q6PI26	577 aa	Known RBP	5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	ARL9	Q6T311	187 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	NOTCH2NL	Q7Z3S9	236 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	RTN4RL2	Q86UN3	420 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	HS3ST5	Q8IZT8	346 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	CYB561A3	Q8NBI2	242 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	ICA1L	Q8NDH6	482 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR2T4	Q8NH00	348 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR4Q3	Q8NH05	313 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	TEX47	Q8TBZ9	253 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	MRPL24	Q96A35	216 aa	Known RBP	5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	NRBF2	Q96F24	287 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	POM121L2	Q96KW2	1035 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	DOK1	Q99704	481 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	RACGAP1	Q9H0H5	632 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR51B6	Q9H340	312 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	NTN4	Q9HB63	628 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	DYNLRB1	Q9NP97	96 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	KLHL21	Q9UJP4	597 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	WDR83OS	Q9Y284	106 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	POLR1D	Q9Y2S0	133 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	TMED3	Q9Y3Q3	217 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	FKBP7	Q9Y680	259 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	PRR14L	Q5THK1	2151 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228	CAD	P27708	2225 aa		5.74	□□□□□ -1.49
SDCBP-208	ENST00000520228		A0A1W2PPW3	197 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	TMEM129	A0AVI4	362 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	RER1	O15258	196 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	DFFB	O76075	338 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	ERCC1	P07992	297 aa	Predicted RBP	5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	ADRA2A	P08913	450 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	COX5B	P10606	129 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	PYCR1	P32322	319 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	HTR5A	P47898	357 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	PPOX	P50336	477 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLC25A1	P53007	311 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	TNK1	Q13470	666 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	CRMP1	Q14194	572 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF273	Q14593	569 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	GINS1	Q14691	196 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	MEP1B	Q16820	701 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	GFI1B	Q5VTD9	330 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLC27A4	Q6P1M0	643 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	CLEC2A	Q6UVW9	174 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	LRP11	Q86VZ4	500 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	HIPK1	Q86Z02	1210 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	MMD2	Q8IY49	270 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLC37A3	Q8NCC5	494 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	PROKR2	Q8NFJ6	384 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	SLC26A10	Q8NG04	563 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR1F12	Q8NHA8	337 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR5K1	Q8NHB7	308 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	SYNPR	Q8TBG9	265 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	DNAJC9	Q8WXX5	260 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	DUS3L	Q96G46	650 aa	Known RBP	5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	C18orf12	Q96KH6	178 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	MRPL37	Q9BZE1	423 aa	Known RBP	5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	BCL2L14	Q9BZR8	327 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	RAB1B	Q9H0U4	201 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	FN3K	Q9H479	309 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	DNAJC4	Q9NNZ3	241 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	CMC2	Q9NRP2	79 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	PLEK2	Q9NYT0	353 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	FZR1	Q9UM11	496 aa		5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	FLNA	P21333	2647 aa	Known RBP	5.73	□□□□□ -1.49
SDCBP-208	ENST00000520228	AKAP9	Q99996	3911 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	ACAN	P16112	2415 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	OR6C6	A6NF89	314 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228		G3V2T6	193 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228		M0R233	179 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	LY6H	O94772	140 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	HMGN1	P05114	100 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	FAM157C	P0CG43	387 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF250	P15622	560 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF823	P16415	610 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	ZNF3	P17036	446 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	PAICS	P22234	425 aa	Known RBP	5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	AZGP1	P25311	298 aa	Known RBP	5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	FMO3	P31513	532 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	GGT2	P36268	569 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	ALDH3B1	P43353	468 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	DAP	P51397	102 aa		5.72	□□□□□ -1.49
SDCBP-208	ENST00000520228	KLF3	P57682	345 aa	Predicted RBP	5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms