RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 ENDOGQ14249 297 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 TBCEQ15813 527 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ATP6AP1Q15904 470 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ALKBH6Q3KRA9 238 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 CYBRD1Q53TN4 286 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ALG10Q5BKT4 473 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 C9orf152Q5JTZ5 239 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ATAD3CQ5T2N8 411 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 DCAF12L2Q5VW00 463 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 C8orf82Q6P1X6 216 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ARL9Q6T311 187 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 LRRN1Q6UXK5 716 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 LRRC28Q86X40 367 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 CATSPERDQ86XM0 798 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 SVOPQ8N4V2 548 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ZDHHC22Q8N966 263 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 NPEPL1Q8NDH3 523 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 CCDC54Q8NEL0 328 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 OR6F1Q8NGZ6 308 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 SLC25A40Q8TBP6 338 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ZFAND1Q8TCF1 268 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 S100ZQ8WXG8 99 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 POP5Q969H6 163 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 HAVCR1Q96D42 359 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 RNF170Q96K19 258 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 CLPTM1LQ96KA5 538 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 C4orf45Q96LM5 186 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 PRRC1Q96M27 445 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 PCGF1Q9BSM1 259 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 GGACTQ9BVM4 153 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 OR2J1Q9GZK6 312 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ANKRD19PQ9H560 264 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 SAR1AQ9NR31 198 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 POLE4Q9NR33 117 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 NDRG4Q9ULP0 352 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 NPTNQ9Y639 398 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 U3KQV3 271 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 ARHGAP32A7KAX9 2087 aa4.77□□□□□ -1.65
CTNNA1-219ENST00000520158 A0A087WUU8 490 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ELOA3CA0A087WX78 387 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 A0A0G2JND7 137 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ELOVL7A1L3X0 281 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 MEIOCA2RUB1 952 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 J3QRK9 145 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 MRASO14807 208 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SPRY1O43609 319 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SPRY3O43610 288 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 PRSS23O95084 383 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SCG5P05408 212 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 HKR1P10072 659 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 TNFRSF1AP19438 455 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 TNFRSF1BP20333 461 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 MAKP20794 623 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 MSR1P21757 451 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 FPR2P25090 351 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ZFP36P26651 326 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 GRK5P34947 590 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ARL3P36405 182 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 GUCA1AP43080 201 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 OR1E2P47887 323 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SERPINB10P48595 397 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 CTXN1P60606 82 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 LSM6P62312 80 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 HIST1H3AP68431 136 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 PAX2Q02962 417 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 PAX8Q06710 450 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SCN1BQ07699 218 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SF3A3Q12874 501 aaKnown RBP eCLIP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 GAMTQ14353 236 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 HLXQ14774 488 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 GUK1Q16774 197 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 MICBQ29980 383 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ZNF181Q2M3W8 571 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 MTX3Q5HYI7 312 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 PRR31Q5SQ13 230 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 AVPI1Q5T686 147 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 HIST2H3PS2Q5TEC6 136 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 PRAMEF5Q5TYX0 476 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 PRAMEF6Q5VXH4 476 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 FBXW12Q6X9E4 464 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 Q6ZR03 302 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 C9orf139Q6ZV77 190 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 HIST2H3AQ71DI3 136 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 CBLL1Q75N03 491 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 DOK3Q7L591 496 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 TSEN54Q7Z6J9 526 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 OAFQ86UD1 273 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 NOXA1Q86UR1 476 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ZNF573Q86YE8 665 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 FAM58AQ8N1B3 248 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 STX19Q8N4C7 294 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 DEFB108BQ8NET1 73 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 DMBX1Q8NFW5 382 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 STXBP6Q8NFX7 210 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 OR2T12Q8NG77 320 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 SETD6Q8TBK2 473 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 ACOT11Q8WXI4 607 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 CCL17Q92583 94 aa4.76□□□□□ -1.65
CTNNA1-219ENST00000520158 GCDHQ92947 438 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms