RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 GAS8-AS1O95177 125 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 IGKV1D-33P01593 117 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 IGKV1-33P01594 117 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HSPB1P04792 205 aaKnown RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HIST1H2ABP04908 130 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 CHRNGP07510 517 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 EDN2P20800 178 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 VDAC1P21796 283 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 PRDX2P32119 198 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 GUCA1AP43080 201 aaPredicted RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 CLNS1AP54105 237 aaKnown RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 LSM6P62312 80 aaKnown RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 DR1Q01658 176 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 KLF5Q13887 457 aaPredicted RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HLA-DRB5Q30154 266 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 CD300EQ496F6 205 aaPredicted RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 GTDC1Q4AE62 458 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 FAM76BQ5HYJ3 339 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 PRAMEF5Q5TYX0 476 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 LCN12Q6JVE5 192 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 DHRS4L2Q6PKH6 230 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 Q6ZSN1 163 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 Q6ZWC4 215 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HIST3H2AQ7L7L0 130 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HDDC2Q7Z4H3 204 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 TGIF2LXQ8IUE1 241 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 LINC00346Q8IVM7 164 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 STPG3Q8N7X2 389 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 FNDC5Q8NAU1 212 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HPSE2Q8WWQ2 592 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 HIST1H2ACQ93077 130 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 PPP3R2Q96LZ3 170 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 ZNF714Q96N38 554 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 DPH5Q9H2P9 285 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 GRPEL1Q9HAV7 217 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 BCL2L10Q9HD36 194 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 LZTFL1Q9NQ48 299 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 GPR173Q9NS66 373 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 LIN7CQ9NUP9 197 aaKnown RBP4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 SLC23A1Q9UHI7 598 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 SELENOKQ9Y6D0 94 aa4.93□□□□□ -1.62
CTNNA1-216ENST00000519489 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 TEX13CA0A0J9YWL9 993 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 CPSF4LA6NMK7 179 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 PSMD9O00233 223 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 ZNF737O75373 536 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 CD74P04233 296 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 SLC2A1P11166 492 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 IL12AP29459 219 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 FCGR2BP31994 310 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 KIR2DS2P43631 304 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 RGS8P57771 180 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 DSTNP60981 165 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 FAM3AP98173 230 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 MZT1Q08AG7 82 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 EBI3Q14213 229 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 RFX4Q33E94 735 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 C19orf54Q5BKX5 351 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 AGBL2Q5U5Z8 902 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 ZYG11AQ6WRX3 759 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 ZNF621Q6ZSS3 439 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 BATF2Q8N1L9 274 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 CYB561A3Q8NBI2 242 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 RCN3Q96D15 328 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 ARMC7Q9H6L4 198 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 SLA2Q9H6Q3 261 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 CALML5Q9NZT1 146 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 LPAP08519 4548 aa4.92□□□□□ -1.62
CTNNA1-216ENST00000519489 IGHV3-72A0A0B4J1Y9 119 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 OR6C68A6NDL8 312 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 K7N7A8 449 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 DCTN6O00399 190 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 DLGAP1O14490 977 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 TIPRLO75663 272 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 DNAJC8O75937 253 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 P0DMU3 169 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 FAM231AP0DMU4 169 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 FAM231CP0DMU5 169 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 PSKH1P11801 424 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 NPBWR2P48146 333 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 KRTAP10-1P60331 282 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 RAB40BQ12829 278 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 MESTQ5EB52 335 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 ANXA8L1Q5VT79 327 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 PVRIGQ6DKI7 326 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 SLC18B1Q6NT16 456 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 ZNF613Q6PF04 617 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 TTC33Q6PID6 262 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 ZNF561Q8N587 486 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 MINDY2Q8NBR6 621 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 OR6T1Q8NGN1 323 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 LIPHQ8WWY8 451 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 OR5P3Q8WZ94 311 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 SPSB4Q96A44 273 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 MCHR1Q99705 422 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 SPATA5L1Q9BVQ7 753 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 MFFQ9GZY8 342 aa4.91□□□□□ -1.62
CTNNA1-216ENST00000519489 PLEKHA1Q9HB21 404 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms