RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 GID4Q8IVV7 300 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ZDHHC23Q8IYP9 409 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 FTMTQ8N4E7 242 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 OR51G2Q8NGK0 314 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 OR8J1Q8NGP2 316 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 LHFPL5Q8TAF8 219 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 TRUB1Q8WWH5 349 aaKnown RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 RNF166Q96A37 237 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 HRASLS5Q96KN8 279 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 WDFY2Q96P53 400 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 DUX5Q96PT3 197 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 RAB3IPQ96QF0 476 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 TBX5Q99593 518 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 RBM4BQ9BQ04 359 aaKnown RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 CHCHD6Q9BRQ6 235 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 GPR61Q9BZJ8 451 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 SIRPDQ9H106 197 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 RIBC2Q9H4K1 309 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ABCB9Q9NP78 766 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 ENOPH1Q9UHY7 261 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 RPUSD1Q9UJJ7 312 aaKnown RBP7.72□□□□□ -1.17
HDAC3-215ENST00000519474 OR52A1Q9UKL2 312 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 PIGLQ9Y2B2 252 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 R4GMQ9 66 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 V9GYS6 101 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 MXRA5Q9NR99 2828 aa7.72□□□□□ -1.17
HDAC3-215ENST00000519474 TRAV40A0A0B4J280 105 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 A6NIN4 97 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 METTL15A6NJ78 407 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 P2RY10O00398 339 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 SHOXO15266 292 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 NDUFB3O43676 98 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 RPP14O95059 124 aaKnown RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 ALX3O95076 343 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 APOL3O95236 402 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 ACAA1P09110 424 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 FAHP16930 419 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 MTNR1AP48039 350 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 GNG2P59768 71 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 GMFBP60983 142 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 GNG3P63215 75 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 SLC9A3R2Q15599 337 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 DEFB112Q30KQ8 113 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF829Q3KNS6 432 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 ZIK1Q3SY52 487 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 FAM209BQ5JX69 171 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 SLC25A30Q5SVS4 291 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 ZBTB37Q5TC79 503 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 TMEM42Q69YG0 159 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 STUMQ69YW2 141 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 RBMS3Q6XE24 437 aaKnown RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 BRD3OSQ6XYD6 125 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 SLC36A1Q7Z2H8 476 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 THAP5Q7Z6K1 395 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 YIPF7Q8N8F6 280 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 PNLDC1Q8NA58 520 aaKnown RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF671Q8TAW3 534 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 AQP3Q92482 292 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 RORBQ92753 470 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 TMIGD2Q96BF3 282 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 C12orf43Q96C57 262 aaKnown RBP7.71□□□□□ -1.18
HDAC3-215ENST00000519474 DMRTB1Q96MA1 342 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 PCGF1Q9BSM1 259 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 DNTTIP1Q9H147 329 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 USE1Q9NZ43 259 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 PTTG2Q9NZH5 202 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 AASSQ9UDR5 926 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 MAB21L2Q9Y586 359 aa7.71□□□□□ -1.18
HDAC3-215ENST00000519474 IGKV1D-17A0A075B6S4 117 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 MDFIC2A0A1B0GVS7 189 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 SMIM31A0A1B0GVY4 71 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 DNAJC9-AS1A6NH13 148 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 OR2AT4A6NND4 320 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 CLDN34H7C241 214 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 J3QRE1 110 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 DLGAP1O14490 977 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 ENTPD6O75354 484 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 SULT1C4O75897 302 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 DHRS3O75911 302 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 HKR1P10072 659 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 PSG2P11465 335 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 GLRA1P23415 457 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 RAB4BP61018 213 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 SNRPGP62308 76 aaKnown RBP7.7□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF85Q03923 595 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 OCLNQ16625 522 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 DGUOKQ16854 277 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 ZFP1Q6P2D0 407 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 Q6YL49 198 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 GPR141Q7Z602 305 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 CATSPERDQ86XM0 798 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 FAM216BQ8N7L0 139 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 Q8N7P7 452 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 ST8SIA4Q92187 359 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 TAF15Q92804 592 aaKnown RBP eCLIP7.7□□□□□ -1.18
HDAC3-215ENST00000519474 TRIM63Q969Q1 353 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 GAFA1Q96PS6 74 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 DCTN5Q9BTE1 182 aa7.7□□□□□ -1.18
HDAC3-215ENST00000519474 SPACA1Q9HBV2 294 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms