RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 FAM160A2Q8N612 972 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 NECAP1Q8NC96 275 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 NUS1Q96E22 293 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 ALKBH7Q9BT30 221 aaPredicted RBP11.9□□□□□ -0.5
PABPC1-208ENST00000519004 G6PC2Q9NQR9 355 aa11.9□□□□□ -0.5
PABPC1-208ENST00000519004 BGLAPP02818 100 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ISG15P05161 165 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF888P0CJ79 500 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM225BP0DP42 221 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 CSNK2A1P68400 391 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 PRDX4Q13162 271 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 OR8G2PQ6IF36 304 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 SHISA5Q8N114 240 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 OR51G1Q8NGK1 321 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 PTPMT1Q8WUK0 201 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 LIPHQ8WWY8 451 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 BOD1Q96IK1 185 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ST6GALNAC5Q9BVH7 336 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 HIPK2Q9H2X6 1198 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 R4GMQ9 66 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 NKX2-2O95096 273 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 CT62P0C5K7 136 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ASAH2BP0C7U1 165 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 CSNK1A1P48729 337 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 SNU13P55769 128 aaKnown RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ENDOGQ14249 297 aaKnown RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF266Q14584 549 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ACOT6Q3I5F7 207 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 SMIM15Q7Z3B0 74 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 MFSD9Q8NBP5 474 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 OR52M1Q8NGK5 317 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 OR10S1Q8NGN2 331 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ADOQ96SZ5 270 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 PCGF1Q9BSM1 259 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ABHD6Q9BV23 337 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 RBKSQ9H477 322 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 LRIT1Q9P2V4 623 aa11.89□□□□□ -0.51
PABPC1-208ENST00000519004 SNRNP200O75643 2136 aaKnown RBP11.89□□□□□ -0.51
PABPC1-208ENST00000519004 P2RY10O00398 339 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 CIDEAO60543 219 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 JMJD7P0C870 316 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 TAS2R46P59540 309 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 IL24Q13007 206 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 MLF2Q15773 248 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-208ENST00000519004 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 KCTD18Q6PI47 426 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-208ENST00000519004 GCNT2Q8N0V5 402 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 STPG4Q8N801 248 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 OR4N2Q8NGD1 307 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 REEP6Q96HR9 211 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 ARHGAP5-AS1Q96IT6 56 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 MMP25Q9NPA2 562 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 MYOFQ9NZM1 2061 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 AQP7O14520 342 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 NUPR1O60356 82 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 MPIG6BO95866 241 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 IGHEP01854 428 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 HBE1P02100 147 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 CTSDP07339 412 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-208ENST00000519004 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
PABPC1-208ENST00000519004 METAP1P53582 386 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
PABPC1-208ENST00000519004 RUNX2Q13950 521 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 VHLLQ6RSH7 139 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 KMT5CQ86Y97 462 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 SULF2Q8IWU5 870 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 IL22RA1Q8N6P7 574 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM171Q8WVE6 324 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 CCDC74BQ96LY2 380 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 CISD1Q9NZ45 108 aaKnown RBP11.88□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 GNG13Q9P2W3 67 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 MPDZO75970 2070 aa11.88□□□□□ -0.51
PABPC1-208ENST00000519004 PITX3O75364 302 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 SFTPDP35247 375 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 RAB28P51157 221 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 MGAT2Q10469 447 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 UBE2V1Q13404 147 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 MPV17LQ2QL34 196 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 PLPP4Q5VZY2 271 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM215Q68D42 235 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 LYZL2Q7Z4W2 148 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 CACUL1Q86Y37 369 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 TMEM256Q8N2U0 113 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 C1orf147Q96MC9 270 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-208ENST00000519004 PAM16Q9Y3D7 125 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 SCN2AQ99250 2005 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 IGSF23A1L1A6 192 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
PABPC1-208ENST00000519004 ZNF732B4DXR9 585 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms