RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 OR13G1Q8NGZ3 307 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 DDIT4LQ96D03 193 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 ZMYND19Q96E35 227 aaPredicted RBP4.8□□□□□ -1.64
SQLE-203ENST00000518931 NKX3-1Q99801 234 aaPredicted RBP4.8□□□□□ -1.64
SQLE-203ENST00000518931 FAM173AQ9BQD7 235 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 TCEAL7Q9BRU2 100 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 HMG20AQ9NP66 347 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 IL1RAPQ9NPH3 570 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 MIEF1Q9NQG6 463 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 TAS2R13Q9NYV9 303 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 DKKL1Q9UK85 242 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 C14orf166Q9Y224 244 aaKnown RBP4.8□□□□□ -1.64
SQLE-203ENST00000518931 TRAPPC4Q9Y296 219 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 OR51B2Q9Y5P1 312 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 HSPE1-MOB4S4R3N1 261 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 LRRC7Q96NW7 1537 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 ARAP1Q96P48 1450 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 CFAP43Q8NDM7 1665 aa4.8□□□□□ -1.64
SQLE-203ENST00000518931 HECW1Q76N89 1606 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 A6NDN8 102 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 GPR31O00270 319 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 TNFRSF11BO00300 401 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 DUSP11O75319 330 aaKnown RBP4.79□□□□□ -1.64
SQLE-203ENST00000518931 SCO1O75880 301 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 TTC4O95801 387 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 IFNA10P01566 189 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 CD1EP15812 388 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 RAP1BP61224 184 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 SLC7A9P82251 487 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 MYL5Q02045 173 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 TMEM187Q14656 261 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 IRF4Q15306 451 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 LRRC75BQ2VPJ9 315 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 KIAA1644Q3SXP7 199 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 ZFP69Q49AA0 526 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 VAX1Q5SQQ9 334 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 ZNF790Q6PG37 636 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 ARIH2OSQ8N7S6 290 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 GATD1Q8NB37 220 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 OR2T33Q8NG76 320 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 OR51Q1Q8NH59 317 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 GATAD1Q8WUU5 269 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 RASL10AQ92737 203 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 EXOSC8Q96B26 276 aaKnown RBP4.79□□□□□ -1.64
SQLE-203ENST00000518931 ISOC1Q96CN7 298 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 SERPINI1Q99574 410 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 GABRG3Q99928 467 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 RASL11BQ9BPW5 248 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 NT5DC2Q9H857 520 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 SLC7A10Q9NS82 523 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 DDIT4Q9NX09 232 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 EHFQ9NZC4 300 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 TP53TG5Q9Y2B4 290 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.79□□□□□ -1.64
SQLE-203ENST00000518931 UFC1Q9Y3C8 167 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 RPRD2Q5VT52 1461 aaKnown RBP4.79□□□□□ -1.64
SQLE-203ENST00000518931 PTPN23Q9H3S7 1636 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
SQLE-203ENST00000518931 MYH11P35749 1972 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CUX1P39880 1505 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CHD1O14646 1710 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 RAPGEF2Q9Y4G8 1499 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 TGIF2-C20orf24A0A0A6YYL0 155 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 C9orf170A2RU37 121 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CEACAM18A8MTB9 384 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 NME4O00746 187 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 ZNF780AO75290 641 aaPredicted RBP4.78□□□□□ -1.64
SQLE-203ENST00000518931 SPAG7O75391 227 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 GAS8-AS1O95177 125 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CTSLP07711 333 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 OR13C7P0DN81 318 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 ZNF250P15622 560 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 SPI1P17947 270 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 SDC1P18827 310 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 ZNF121P58317 390 aaPredicted RBP4.78□□□□□ -1.64
SQLE-203ENST00000518931 GNG3P63215 75 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 KCNJ11Q14654 390 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CLINT1Q14677 625 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 TEAD2Q15562 447 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 MRGPRG-AS1Q2M3A8 158 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 TMEM30BQ3MIR4 351 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 RNF212Q495C1 297 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 HSD17B12Q53GQ0 312 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 FAM78BQ5VT40 261 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 FAM53AQ6NSI3 398 aaPredicted RBP4.78□□□□□ -1.64
SQLE-203ENST00000518931 GSG1LQ6UXU4 331 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 PRSS41Q7RTY9 318 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CATSPER3Q86XQ3 398 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 PNKDQ8N490 385 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 OR4C13Q8NGP0 309 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 OR13C6PQ8NH95 151 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 ASB17Q8WXJ9 295 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 DYNLL2Q96FJ2 89 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 LITAFQ99732 161 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 CMSS1Q9BQ75 279 aaKnown RBP4.78□□□□□ -1.64
SQLE-203ENST00000518931 MED18Q9BUE0 208 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 MND1Q9BWT6 205 aa4.78□□□□□ -1.64
SQLE-203ENST00000518931 MS4A6AQ9H2W1 248 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms