RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 BTCP35070 178 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF547Q8IVP9 402 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF808Q8N4W9 903 aaPredicted RBP10.03□□□□□ -0.8
TCOF1-211ENST00000513346 OR2C3Q8N628 320 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 C16orf52Q8NHV5 167 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 TECTBQ96PL2 329 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 CNTD2Q9H8S5 307 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 DYNLRB1Q9NP97 96 aa10.03□□□□□ -0.8
TCOF1-211ENST00000513346 CTXN2P0C2S0 81 aa10.02□□□□□ -0.8
TCOF1-211ENST00000513346 CATR1Q13166 79 aa10.02□□□□□ -0.8
TCOF1-211ENST00000513346 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.8
TCOF1-211ENST00000513346 OR51H1Q8NH63 302 aa10.02□□□□□ -0.8
TCOF1-211ENST00000513346 TMEM68Q96MH6 324 aa10.02□□□□□ -0.8
TCOF1-211ENST00000513346 WFDC6Q9BQY6 131 aa10.02□□□□□ -0.8
TCOF1-211ENST00000513346 FAM166BA8MTA8 275 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 PIAS2O75928 621 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 SLC10A1Q14973 349 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 OR8U1Q8NH10 309 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 NGBQ9NPG2 151 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 PRR13Q9NZ81 148 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 RP1P56715 2156 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 F6UZH7 168 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 ABHD16AO95870 558 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 ZGLP1P0C6A0 271 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 PCP4P48539 62 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 MLF1P58340 268 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 PPP1CBP62140 327 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 SURF2Q15527 256 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-211ENST00000513346 SPANXN5Q5MJ07 72 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 OR4N2Q8NGD1 307 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 OR10AC1Q8NH08 325 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 M1APQ8TC57 530 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
TCOF1-211ENST00000513346 R4GN57 208 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 GEMIN2O14893 280 aaKnown RBP10.02□□□□□ -0.81
TCOF1-211ENST00000513346 ST8SIA5O15466 376 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 PRKNO60260 465 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-211ENST00000513346 NTF3P20783 257 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 GPR3P46089 330 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 NANOS3P60323 173 aaKnown RBP10.02□□□□□ -0.81
TCOF1-211ENST00000513346 FAM3AP98173 230 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 MRGPREQ86SM8 312 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 CDC20BQ86Y33 519 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 OR5C1Q8NGR4 320 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 NT5CQ8TCD5 201 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 KTI12Q96EK9 354 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-211ENST00000513346 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 CHST11Q9NPF2 352 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 DOK5Q9P104 306 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 NEUROG3Q9Y4Z2 214 aa10.02□□□□□ -0.81
TCOF1-211ENST00000513346 FAM24AA6NFZ4 105 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 CLN5O75503 358 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 MGST1P10620 155 aaKnown RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 RCC1P18754 421 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ZBTB25P24278 435 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 DRD3P35462 400 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 APOBEC1P41238 236 aaKnown RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 EIF3IQ13347 325 aaKnown RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ISXQ2M1V0 245 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 VHLLQ6RSH7 139 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 CCDC74BQ96LY2 380 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 TAAR9Q96RI9 348 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 FKBP11Q9NYL4 201 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ICOSLGO75144 302 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 GAPDHP04406 335 aaKnown RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 NHLH2Q02577 135 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF92Q03936 586 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ACER2Q5QJU3 275 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 DEGS2Q6QHC5 323 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 TMEM92Q6UXU6 159 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 LANCL3Q6ZV70 420 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 FAM221AA4D161 298 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 HSPB6O14558 160 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 TOX4O94842 621 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 CD8AP01732 235 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 HEXAP06865 529 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 P2RY1P47900 373 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 THEM4Q5T1C6 240 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 YRDCQ86U90 279 aaKnown RBP10.01□□□□□ -0.81
TCOF1-211ENST00000513346 ZPBPQ9BS86 351 aa10.01□□□□□ -0.81
TCOF1-211ENST00000513346 PGA3P0DJD8 388 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 FKBP2P26885 142 aaKnown RBP10□□□□□ -0.81
TCOF1-211ENST00000513346 LINC01555Q8NAE3 123 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 MENTQ9BUN1 341 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 Q9N2K0 584 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF331Q9NQX6 463 aaPredicted RBP10□□□□□ -0.81
TCOF1-211ENST00000513346 TNFSF15O95150 251 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 ONECUT2O95948 504 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 COX5AP20674 150 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 IL2RGP31785 369 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 SPEM2Q0P670 501 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 GGTLC2Q14390 218 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 DHRS11Q6UWP2 260 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 SLC36A1Q7Z2H8 476 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 IL22RA2Q969J5 263 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 GPR61Q9BZJ8 451 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 CTDSP1Q9GZU7 261 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 NAA60Q9H7X0 242 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms