RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 PPIAL4DF5H284 164 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PDCD5O14737 125 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 SYNGR1O43759 233 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 NOS1APO75052 506 aaPredicted RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 RHBDL1O75783 438 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 CYB5R3P00387 301 aaPredicted RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PLATP00750 562 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 LHBP01229 141 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 IGHV2-70P01814 119 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 ACAA1P09110 424 aaPredicted RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PGA5P0DJD9 388 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PPIAL4FP0DN26 164 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 ADRA2CP18825 462 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 GLRA1P23415 457 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 NR4A2P43354 598 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 RPL5P46777 297 aaKnown RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 BTG1P62324 171 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PDZK1IP1Q13113 114 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 KCNJ8Q15842 424 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 SMIM21Q3B7S5 101 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 TEX36Q5VZQ5 186 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 GLT8D1Q68CQ7 371 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 CRIP3Q6Q6R5 217 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 SLC25A26Q70HW3 274 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 GPR141Q7Z602 305 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 LRRTM1Q86UE6 522 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 SATL1Q86VE3 508 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 SAXO1Q8IYX7 474 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 MUC20Q8N307 709 aaPredicted RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 JAGN1Q8N5M9 183 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 ZSCAN4Q8NAM6 433 aaPredicted RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 POC1AQ8NBT0 407 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PXT1Q8NFP0 134 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 OR5D18Q8NGL1 313 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 FOXRED1Q96CU9 486 aaPredicted RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 CEP19Q96LK0 163 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 Q96MF0 132 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 KCTD7Q96MP8 289 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 UQCC2Q9BRT2 126 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 FUNDC2Q9BWH2 189 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PPIL3Q9H2H8 161 aaKnown RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 RHOFQ9HBH0 211 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 SMURF1Q9HCE7 757 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 ITGB1BP2Q9UKP3 347 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 PPIAL4AQ9Y536 164 aa6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 FLNAP21333 2647 aaKnown RBP6.37□□□□□ -1.39
HMGXB3-204ENST00000513318 TRAV38-1A0A0B4J264 116 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 OOEPA6NGQ2 149 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 CYSRT1A8MQ03 144 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 TRAPPC2LH3BP13 241 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 LGALS8O00214 317 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 AKR7A2O43488 359 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 SPRY1O43609 319 aaPredicted RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 AIREO43918 545 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 KDM4BO94953 1096 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 NXPH2O95156 264 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 TMEM225BP0DP42 221 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 MUC1P15941 1255 aaPredicted RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 EGR1P18146 543 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 CD80P33681 288 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 MDH2P40926 338 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 RANBP1P43487 201 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 OR3A4PP47883 348 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 MTNR1BP49286 362 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 PSMD7P51665 324 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 ERVK11-1P61568 191 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 HNRNPA0Q13151 305 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 ZMYND11Q15326 602 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 ZNF404Q494X3 552 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 TMEM155Q4W5P6 130 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 AVPI1Q5T686 147 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 FIP1L1Q6UN15 594 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 RNF144BQ7Z419 303 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 TPRA1Q86W33 373 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 ANGPTL5Q86XS5 388 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 LYPD6Q86Y78 171 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 FAM90A1Q86YD7 464 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 SPICQ8N5J4 248 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 BOLLQ8N9W6 283 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 WFDC11Q8NEX6 87 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 OR6M1Q8NGM8 313 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 OR51F2Q8NH61 342 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 TNFAIP8L1Q8WVP5 186 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 SLAMF9Q96A28 289 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 TMIGD2Q96BF3 282 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 C12orf43Q96C57 262 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 DMRTB1Q96MA1 342 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 S100A13Q99584 98 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 GAL3ST1Q99999 423 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 NRIP2Q9BQI9 281 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 CENPOQ9BU64 300 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 FAM192AQ9GZU8 254 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 HES4Q9HCC6 221 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 RASL12Q9NYN1 266 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 MTCH1Q9NZJ7 389 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 NLKQ9UBE8 527 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 DNAJB11Q9UBS4 358 aa6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 AK6Q9Y3D8 172 aaKnown RBP6.36□□□□□ -1.39
HMGXB3-204ENST00000513318 MAP1AP78559 2803 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 A0A096LNT2 108 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms