RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	TMEM255A	Q5JRV8	349 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	DCAF12L2	Q5VW00	463 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	RNLS	Q5VYX0	342 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	HAGHL	Q6PII5	290 aa	Predicted RBP	6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340		Q6ZSR3	168 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	LHFPL2	Q6ZUX7	228 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	FAM90A1	Q86YD7	464 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	MS4A15	Q8N5U1	240 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	PNLDC1	Q8NA58	520 aa	Known RBP	6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	DEFB108B	Q8NET1	73 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	OR14K1	Q8NGZ2	314 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	FBLIM1	Q8WUP2	373 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	TMEM186	Q96B77	213 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	DGCR14	Q96DF8	476 aa	Known RBP	6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	MSI2	Q96DH6	328 aa	Known RBP	6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	C1orf159	Q96HA4	380 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	CNBD2	Q96M20	576 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	S100A13	Q99584	98 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	MRI1	Q9BV20	369 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	YTHDF1	Q9BYJ9	559 aa	Known RBP	6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	PKIB	Q9C010	78 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	CHST5	Q9GZS9	411 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	CCDC90B	Q9GZT6	254 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	TLNRD1	Q9H1K6	362 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	RHOF	Q9HBH0	211 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	GPR173	Q9NS66	373 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	HIF1AN	Q9NWT6	349 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	FRRS1L	Q9P0K9	344 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	ZNF281	Q9Y2X9	895 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	CBY1	Q9Y3M2	126 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	CACNG2	Q9Y698	323 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	ATR	Q13535	2644 aa		6.28	□□□□□ -1.4
NR1I3-231	ENST00000512340	DOCK11	Q5JSL3	2073 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A096LNT2	108 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A1B0GTI1	187 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A1W2PPH5	198 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	C5orf63	A6NC05	138 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	OR4C45	A6NMZ5	311 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	CEACAM18	A8MTB9	384 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	SRRM5	B3KS81	715 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	C3orf80	F5H4A9	247 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	TRAPPC2L	H3BP13	241 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	SLC1A7	O00341	560 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	NDUFB3	O43676	98 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	GATC	O43716	136 aa	Known RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	XPNPEP2	O43895	674 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	CLN5	O75503	358 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	NXPH2	O95156	264 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	CD1A	P06126	327 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	CDK1	P06493	297 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	LIPF	P07098	398 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	HCK	P08631	526 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	ATF1	P18846	271 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	RAB3A	P20336	220 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	KIR3DL2	P43630	455 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	BMX	P51813	675 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	LMO4	P61968	165 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	IL24	Q13007	206 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	CDK5R1	Q15078	307 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	TRAM1	Q15629	374 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	YIF1B	Q5BJH7	314 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMEM42	Q69YG0	159 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAHD2B	Q6P2I3	314 aa	Predicted RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	WDR82	Q6UXN9	313 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	GPR141	Q7Z602	305 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	PRSS35	Q8N3Z0	413 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	SVOP	Q8N4V2	548 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	SCCPDH	Q8NBX0	429 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZNF680	Q8NEM1	530 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	TBC1D15	Q8TC07	691 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	NRG4	Q8WWG1	115 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	GATAD2B	Q8WXI9	593 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	DVL3	Q92997	716 aa	Predicted RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	PPP1R14A	Q96A00	147 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	FGGY	Q96C11	551 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	SMIM19	Q96E16	107 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	FAHD2A	Q96GK7	314 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	GPER1	Q99527	375 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	NEURL2	Q9BR09	285 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMEM246	Q9BRR3	403 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	CDCA4	Q9BXL8	241 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	SLITRK2	Q9H156	845 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	OR51I2	Q9H344	312 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	GSX1	Q9H4S2	264 aa	Predicted RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	ZCCHC4	Q9H5U6	513 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	ISG20L2	Q9H9L3	353 aa	Known RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	EXTL2	Q9UBQ6	330 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	MALRD1	Q5VYJ5	2156 aa		6.27	□□□□□ -1.41
NR1I3-231	ENST00000512340	TANC2	Q9HCD6	1990 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340	LOC105371242	A0A075B767	164 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340	hCG_1809904	A0A1W2PP81	198 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A1W2PPE2	198 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A1W2PR64	198 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340		A0A1W2PRV1	198 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340	PQLC2L	A1A4F0	135 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340		H3BUI4	141 aa		6.26	□□□□□ -1.41
NR1I3-231	ENST00000512340	TMPRSS2	O15393	492 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms