RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MRPS18AQ9NVS2 196 aaKnown RBP7.53□□□□□ -1.2
HTT-208ENST00000510626 CGGBP1Q9UFW8 167 aaPredicted RBP7.53□□□□□ -1.2
HTT-208ENST00000510626 OR2M5A3KFT3 312 aa7.52□□□□□ -1.2
HTT-208ENST00000510626 RPL18Q07020 188 aaKnown RBP7.52□□□□□ -1.2
HTT-208ENST00000510626 ZNF273Q14593 569 aa7.52□□□□□ -1.2
HTT-208ENST00000510626 FAM24BQ8N5W8 94 aa7.52□□□□□ -1.2
HTT-208ENST00000510626 IKZF5Q9H5V7 419 aa7.52□□□□□ -1.2
HTT-208ENST00000510626 TMEM38BQ9NVV0 291 aa7.52□□□□□ -1.2
HTT-208ENST00000510626 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.2
HTT-208ENST00000510626 CNIH1O95406 144 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 IGLV3-27P01718 113 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 ZNF766Q5HY98 468 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 DHRS7BQ6IAN0 325 aaPredicted RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 REC114Q7Z4M0 266 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 IMMP2LQ96T52 175 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 CARHSP1Q9Y2V2 147 aaKnown RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 HLA-DRB5Q30154 266 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 IGLV3-25P01717 112 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 NHLRC1Q6VVB1 395 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 LRRC18Q8N456 261 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 RSG1Q9BU20 258 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 PHLPP1O60346 1717 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 CYB5R3P00387 301 aaPredicted RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 TMEM179BQ7Z7N9 219 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 OR51E1Q8TCB6 317 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 ZNF25P17030 456 aaPredicted RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 ZNF542PQ5EBM4 170 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 FAM173AQ9BQD7 235 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 BARX1Q9HBU1 254 aaPredicted RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 CD207Q9UJ71 328 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 ZNF729A6NN14 1252 aaPredicted RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 OR5D18Q8NGL1 313 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 HSD17B8Q92506 261 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 KIAA1551Q9HCM1 1747 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 A6NCN8 305 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 BCDIN3DQ7Z5W3 292 aaKnown RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 OR5C1Q8NGR4 320 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 RELTQ969Z4 430 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 MOGAT1Q96PD6 335 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 DYNLRB1Q9NP97 96 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 DOCK6Q96HP0 2047 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 PPOXP50336 477 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 PAX5Q02548 391 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 NECAP1Q8NC96 275 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 SLCO1C1Q9NYB5 712 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 PRSS50Q9UI38 385 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 WDR81Q562E7 1941 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 TRGV10A0A0A0MS01 117 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 SCO1O75880 301 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 MMP16P51512 607 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 ERVFRD-1P60508 538 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 BSXQ3C1V8 233 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 CTU1Q7Z7A3 348 aaKnown RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 ZNF740Q8NDX6 193 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 DOCK3Q8IZD9 2030 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 NUDT3O95989 172 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 GJA4P35212 333 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 CYB561P49447 251 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 TOX2Q96NM4 488 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 RNF167Q9H6Y7 350 aa7.52□□□□□ -1.21
HTT-208ENST00000510626 TECRQ9NZ01 308 aaKnown RBP7.52□□□□□ -1.21
HTT-208ENST00000510626 CORTO00230 105 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 IGHA2P01877 340 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 OR3A1P47881 315 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 SULT1A1P50225 295 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 ZNF707Q96C28 371 aaPredicted RBP7.51□□□□□ -1.21
HTT-208ENST00000510626 PERPQ96FX8 193 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 ZPBPQ9BS86 351 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 NDUFS8O00217 210 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 CXorf1O96002 111 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 IGHA1P01876 353 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
HTT-208ENST00000510626 CD82P27701 267 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 COMPP49747 757 aaPredicted RBP7.51□□□□□ -1.21
HTT-208ENST00000510626 SLC25A35Q3KQZ1 300 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 PDFQ9HBH1 243 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 LINC01549A6NIU2 74 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 OGG1O15527 345 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 DHRS3O75911 302 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 VDAC1P21796 283 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
HTT-208ENST00000510626 ZBTB34Q8NCN2 500 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 SIGLEC11Q96RL6 698 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 SLC46A2Q9BY10 475 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 TMEM231Q9H6L2 316 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 QDPRP09417 244 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 PCP4P48539 62 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 TPPP3Q9BW30 176 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 H3BQ15 152 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 AREGP15514 252 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 BCL3P20749 454 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 SFRP2Q96HF1 295 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 ULBP3Q9BZM4 244 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 P4HTMQ9NXG6 502 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 VENTXO95231 258 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 TP53RKQ96S44 253 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 SLC2A8Q9NY64 477 aa7.51□□□□□ -1.21
HTT-208ENST00000510626 RBBP6Q7Z6E9 1792 aaKnown RBP7.51□□□□□ -1.21
HTT-208ENST00000510626 A0A1W2PR48 441 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms