RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TTC23Q5W5X9 447 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF529Q6P280 563 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 HAGHLQ6PII5 290 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 DCDC5Q6ZRR9 648 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 MOB3CQ70IA8 216 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 AHSA2Q719I0 299 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 FAM220AQ7Z4H9 259 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 GLCCI1Q86VQ1 547 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ANGPTL5Q86XS5 388 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SPICQ8N5J4 248 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 CD177Q8N6Q3 437 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 POC1AQ8NBT0 407 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF555Q8NEP9 628 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 OR10Z1Q8NGY1 313 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 OR8S1Q8NH09 359 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ANGPTL6Q8NI99 470 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ERGIC1Q969X5 290 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 TIMD4Q96H15 378 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 RNF170Q96K19 258 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 C1orf147Q96MC9 270 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF48Q96MX3 618 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SPACA5Q96QH8 159 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 CCL13Q99616 98 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 MICU1Q9BPX6 476 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 NRIP2Q9BQI9 281 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 RTL8AQ9BWD3 113 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ANKRD60Q9BZ19 345 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC22A4Q9H015 551 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 SP140LQ9H930 580 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 C8orf4Q9NR00 106 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 INPP5EQ9NRR6 644 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ERVK-18Q9QC07 812 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ENPP5Q9UJA9 477 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF391Q9UJN7 358 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 RPL36Q9Y3U8 105 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 MAB21L2Q9Y586 359 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 INSIG2Q9Y5U4 225 aa5.96□□□□□ -1.46
TOPBP1-207ENST00000509162 IGHV3OR16-10A0A075B7F0 116 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 IGHV2-70DA0A0C4DH43 119 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 TRBV5-5A0A0J9YX44 114 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 A0A1B0GVI7 797 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 MDFIC2A0A1B0GVS7 189 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 hCG_1807616A0A1W2PRN6 198 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 ANKRD61A6NGH8 418 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5B21A6NL26 309 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 TMEM210A6NLX4 147 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 IFNL4K9M1U5 179 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 PIN1P1O15428 100 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 NRASP01111 189 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 MT-ND2P03891 347 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 FAM157CP0CG43 387 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 PITPNBP48739 271 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 TGM4P49221 684 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 CCR9P51686 369 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 ZP1P60852 638 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 ACTA2P62736 377 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 GNG3P63215 75 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 ACTG2P63267 376 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC35A2P78381 396 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 RIPK1Q13546 671 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 C4orf46Q504U0 113 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 CLVS2Q5SYC1 327 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 DMKNQ6E0U4 476 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF788Q6ZQV5 615 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 C1QL2Q7Z5L3 287 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 LYPD6Q86Y78 171 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 C8orf59Q8N0T1 100 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5T2Q8NGG2 359 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 OR13C9Q8NGT0 318 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 OR52N1Q8NH53 320 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 RFT1Q96AA3 541 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 RAB39BQ96DA2 213 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 NEIL1Q96FI4 390 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5M11Q96RB7 305 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 TBX15Q96SF7 602 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 SSBP3Q9BWW4 388 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 ESM1Q9NQ30 184 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 PLCXD1Q9NUJ7 323 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 TAS2R4Q9NYW5 299 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 MTCH1Q9NZJ7 389 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 LRCH1Q9Y2L9 728 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 HSPE1-MOB4S4R3N1 261 aa5.95□□□□□ -1.46
TOPBP1-207ENST00000509162 TRAV8-7A0A075B6U6 113 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 PPIAL4CA0A0B4J2A2 164 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ANXA2P2A6NMY6 339 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 H0YJX3 145 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 DVL1O14640 695 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 OGG1O15527 345 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ADAM20O43506 726 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 MTRF1O75570 445 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 FADS2O95864 444 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 PLATP00750 562 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 CDK1P06493 297 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 SFTPBP07988 381 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 CALCBP10092 127 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 PSG2P11465 335 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ATF1P18846 271 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 BCL3P20749 454 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms