RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 LMO1P25800 156 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 PEX2P28328 305 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 OPRL1P41146 370 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 GPM6AP51674 278 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 OR12D2P58182 307 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 GFOD2Q3B7J2 385 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 SMIM21Q3B7S5 101 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 CEACAM21Q3KPI0 293 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 MINOS1Q5TGZ0 78 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 ACP7Q6ZNF0 438 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 MRPL41Q8IXM3 137 aaKnown RBP7.5□□□□□ -1.21
NEDD9-211ENST00000508546 SLC37A3Q8NCC5 494 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 OR4M1Q8NGD0 313 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 OR51D1Q8NGF3 324 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 OR52L1Q8NGH7 329 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 GNPDA2Q8TDQ7 276 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 AQP3Q92482 292 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 ITFG2Q969R8 447 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 HIST1H2AAQ96QV6 131 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 ABHD6Q9BV23 337 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 NMNAT2Q9BZQ4 307 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 DCAF13Q9NV06 445 aaKnown RBP7.5□□□□□ -1.21
NEDD9-211ENST00000508546 IL20Q9NYY1 176 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 DNAJC27Q9NZQ0 273 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 SAMD4AQ9UPU9 718 aaKnown RBP7.5□□□□□ -1.21
NEDD9-211ENST00000508546 CDH10Q9Y6N8 788 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 MINOS1-NBL1R4GNA1 71 aa7.5□□□□□ -1.21
NEDD9-211ENST00000508546 RBMY1BA6NDE4 496 aaKnown RBP7.49□□□□□ -1.21
NEDD9-211ENST00000508546 RBMY1EA6NEQ0 496 aaKnown RBP7.49□□□□□ -1.21
NEDD9-211ENST00000508546 OR5B21A6NL26 309 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 ZNF732B4DXR9 585 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 TK1P04183 234 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 GYPBP06028 91 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 CHRM2P08172 466 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 RBMY1DP0C7P1 496 aaKnown RBP7.49□□□□□ -1.21
NEDD9-211ENST00000508546 ZNF728P0DKX0 622 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 RAP2AP10114 183 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 HOXB6P17509 224 aaKnown RBP7.49□□□□□ -1.21
NEDD9-211ENST00000508546 SPI1P17947 270 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 PRDX2P32119 198 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 NKAPLQ5M9Q1 402 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 OGFRL1Q5TC84 451 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-211ENST00000508546 LINC01590Q5TEZ4 76 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 LPCAT4Q643R3 524 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 UNQ9370/PRO34162Q6UXP9 181 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 ETV3LQ6ZN32 361 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 POC1AQ8NBT0 407 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 OR5A2Q8NGI9 324 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 OR6K6Q8NGW6 343 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 AKR1E2Q96JD6 320 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 LYZL4Q96KX0 146 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 MAGIXQ9H6Y5 334 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 EGLN3Q9H6Z9 239 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 LIN7BQ9HAP6 207 aa7.49□□□□□ -1.21
NEDD9-211ENST00000508546 LSM4Q9Y4Z0 139 aaKnown RBP7.49□□□□□ -1.21
NEDD9-211ENST00000508546 RAMP3O60896 148 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 NOS1APO75052 506 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-211ENST00000508546 SEMG1P04279 462 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 H2BFMP0C1H6 154 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 IGHV1-8P0DP01 117 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 CLUP10909 449 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 JUNBP17275 347 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-211ENST00000508546 FASP25445 335 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 SLC6A1P30531 599 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 MAP2K3P46734 347 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 THBS3P49746 956 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 DGCR2P98153 550 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 CRMP1Q14194 572 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 ATP6AP1Q15904 470 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 LRRC36Q1X8D7 754 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 KHDC1LQ5JSQ8 128 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 HAGHLQ6PII5 290 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-211ENST00000508546 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 IZUMO2Q6UXV1 221 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 SHFQ7M4L6 423 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 OR6N2Q8NGY6 317 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 EME1Q96AY2 570 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 OR8B4Q96RC9 309 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 INTS14Q96SY0 518 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 AMELYQ99218 206 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 ZNF184Q99676 751 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-211ENST00000508546 VCXQ9H320 206 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 HILPDAQ9Y5L2 63 aa7.48□□□□□ -1.21
NEDD9-211ENST00000508546 K7N7A8 449 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 LPLP06858 475 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 CCDC159P0C7I6 412 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 PGA5P0DJD9 388 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 ATP6V1B1P15313 513 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 CEBPDP49716 269 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-211ENST00000508546 DYNC1I2Q13409 638 aaKnown RBP7.47□□□□□ -1.21
NEDD9-211ENST00000508546 IL18R1Q13478 541 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 ABCA11PQ4W5N1 156 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 CEP78Q5JTW2 689 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 RASSF6Q6ZTQ3 369 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 AMIGO2Q86SJ2 522 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-211ENST00000508546 ERI1Q8IV48 349 aaKnown RBP7.47□□□□□ -1.21
NEDD9-211ENST00000508546 OSR2Q8N2R0 312 aa7.47□□□□□ -1.21
NEDD9-211ENST00000508546 OR8B12Q8NGG6 310 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms