RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DUX4L3P0CJ86 424 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DUX4L4P0CJ87 422 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DUX4L5P0CJ88 424 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DUX4L6P0CJ89 424 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DUX4L7P0CJ90 424 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 NDUFB7P17568 137 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 MYL12AP19105 171 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 PRTN3P24158 256 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 ERVK11-1P61568 191 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 ARF6P62330 175 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 UBA52P62987 128 aaKnown RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 ACTG1P63261 375 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 GUCA2AQ02747 115 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 BLMHQ13867 455 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DMRTC1Q5HYR2 192 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 OGFRL1Q5TC84 451 aaPredicted RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DUX4L9Q6RFH8 374 aaPredicted RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 FIP1L1Q6UN15 594 aaKnown RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 TMPRSS11AQ6ZMR5 421 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 LHFPL2Q6ZUX7 228 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 CALHM1Q8IU99 346 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 RDH10Q8IZV5 341 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 ZDHHC22Q8N966 263 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 OR13C3Q8NGS6 347 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 TRMT10AQ8TBZ6 339 aaKnown RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 NPRL2Q8WTW4 380 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 H1FXQ92522 213 aaKnown RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 CEP19Q96LK0 163 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 ZNF649Q9BS31 505 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 PRDM13Q9H4Q3 707 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 SEBOXQ9HB31 216 aaPredicted RBP16.41■□□□□ 0.22
SFXN1-209ENST00000508290 DUX4Q9UBX2 424 aa16.41■□□□□ 0.22
SFXN1-209ENST00000508290 RFPL4AA6NLU0 287 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 RFPL4AL1F8VTS6 287 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 RGS9O75916 674 aaPredicted RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 ALX3O95076 343 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 SFTPBP07988 381 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 PRDX2P32119 198 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 ADARB1P78563 741 aaKnown RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 BAMBIQ13145 260 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 ANGPTL5Q86XS5 388 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 MKXQ8IYA7 352 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 TMEM185AQ8NFB2 350 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 OR5AK2Q8NH90 309 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 SLC25A28Q96A46 364 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 FGGYQ96C11 551 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 ADAT3Q96EY9 351 aaPredicted RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 CPNE2Q96FN4 548 aaPredicted RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 RHOFQ9HBH0 211 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 CHCHD3Q9NX63 227 aaKnown RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 ONECUT1Q9UBC0 465 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 CAB39Q9Y376 341 aaPredicted RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 EXOSC1Q9Y3B2 195 aaKnown RBP16.4■□□□□ 0.22
SFXN1-209ENST00000508290 MAB21L2Q9Y586 359 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 DOCK11Q5JSL3 2073 aa16.4■□□□□ 0.22
SFXN1-209ENST00000508290 IGHV1-69DA0A0B4J2H0 117 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 CENPVL3A0A0U1RRI6 287 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 IGHV1-69P01742 117 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 LIMS3P0CW19 117 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 LIMS4P0CW20 117 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 ATF1P18846 271 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 AZGP1P25311 298 aaKnown RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 CAPGP40121 348 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 COMPP49747 757 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 ELF3P78545 371 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 NCR3LG1Q68D85 454 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 C8orf59Q8N0T1 100 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 BCL6BQ8N143 479 aaPredicted RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 ZNRF1Q8ND25 227 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 OPALINQ96PE5 141 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 METTL8Q9H825 291 aaKnown RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 ISG20L2Q9H9L3 353 aaKnown RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 UNKLQ9H9P5 680 aaKnown RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 ESM1Q9NQ30 184 aa16.39■□□□□ 0.21
SFXN1-209ENST00000508290 DIMT1Q9UNQ2 313 aaKnown RBP16.39■□□□□ 0.21
SFXN1-209ENST00000508290 A0A1W2PQ09 198 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 DNAJC9-AS1A6NH13 148 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 H3BSH0 61 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 ZFPL1O95159 310 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 RNASE1P07998 156 aaKnown RBP16.38■□□□□ 0.21
SFXN1-209ENST00000508290 CHRM2P08172 466 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 CAPZA1P52907 286 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 MTCP1P56278 107 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 RPL22L1Q6P5R6 122 aaKnown RBP16.38■□□□□ 0.21
SFXN1-209ENST00000508290 SERPINA12Q8IW75 414 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 TMEM86BQ8N661 226 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 OR5D14Q8NGL3 314 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 ZDHHC16Q969W1 377 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 ZNF488Q96MN9 340 aa16.38■□□□□ 0.21
SFXN1-209ENST00000508290 IGHV3OR16-10A0A075B7F0 116 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 TRBV2A0A0J9YWF9 115 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 hCG_1809904A0A1W2PP81 198 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 A0A1W2PPE2 198 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 A0A1W2PR64 198 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 A0A1W2PRV1 198 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 PIPP12273 146 aaPredicted RBP16.37■□□□□ 0.21
SFXN1-209ENST00000508290 SELLP14151 372 aa16.37■□□□□ 0.21
SFXN1-209ENST00000508290 EEF1B2P24534 225 aaKnown RBP16.37■□□□□ 0.21
SFXN1-209ENST00000508290 SMN1Q16637 294 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms