RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZXDCQ2QGD7 858 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 FAM27D1Q5T7N8 215 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 Q6ZWC4 215 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 RTN4RL1Q86UN2 441 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 GPSM1Q86YR5 675 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 TMEM192Q8IY95 271 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 OR8I2Q8N0Y5 310 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 GALMQ96C23 342 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 TPSD1Q9BZJ3 242 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 NMNAT2Q9BZQ4 307 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 BANF2Q9H503 90 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 SLC2A6Q9UGQ3 507 aa9.52□□□□□ -0.89
PDLIM5-210ENST00000508216 ZNF236Q9UL36 1845 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 A0A0J9YY10 115 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 A0A1B0GX78 115 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 B4DGG1 531 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 FFAR1O14842 300 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 HAND1O96004 215 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 MAS1P04201 325 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 ID1P41134 155 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 TSFMP43897 325 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 NPBWR2P48146 333 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 TAS2R41P59536 307 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 TAS2R31P59538 309 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 SRSF7Q16629 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 SPATA45Q537H7 98 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 TP53I3Q53FA7 332 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 GATSQ8NAP1 163 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 OR4F17Q8NGA8 305 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 OR5AU1Q8NGC0 362 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 SYNPRQ8TBG9 265 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 GPR82Q96P67 336 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 OR4F4Q96R69 305 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 NDC1Q9BTX1 674 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 OR2S2Q9NQN1 319 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 CMC2Q9NRP2 79 aa9.51□□□□□ -0.89
PDLIM5-210ENST00000508216 hCG_38984A0A1B0GV85 526 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 H0YL77 283 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 J3KTA2 159 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 K7N7A8 449 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 CD5LO43866 347 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 S1PR2O95136 353 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 CDS2O95674 445 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 HBZP02008 142 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 DUSP3P51452 185 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 ADAM8P78325 824 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 UPP1Q16831 310 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 CTXN3Q4LDR2 81 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 LINC00696Q6ZRV3 163 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 LCNL1Q6ZST4 164 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 SAXO1Q8IYX7 474 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 ZNF615Q8N8J6 731 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 NHLRC2Q8NBF2 726 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 OR2T33Q8NG76 320 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 OR52R1Q8NGF1 315 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 OR4L1Q8NH43 312 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 NUDT9Q9BW91 350 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 ANKRD10Q9NXR5 420 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 AHSPQ9NZD4 102 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 MTCH1Q9NZJ7 389 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 TRAPPC2LQ9UL33 140 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 THSD7BQ9C0I4 1608 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 CKAP5Q14008 2032 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 TRAV38-1A0A0B4J264 116 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 HRKO00198 91 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 TACSTD2P09758 323 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 NSG1P42857 185 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 HMGCS1Q01581 520 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 TMEM267Q0VDI3 215 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 TTLL4Q14679 1199 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 GNMTQ14749 295 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 EXOSC7Q15024 291 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 MEP1BQ16820 701 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 MRPL54Q6P161 138 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 DOLPP1Q86YN1 238 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 ZIC4Q8N9L1 334 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 RBMXL1Q96E39 390 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 RASL10BQ96S79 203 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 MYADMQ96S97 322 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 TMEM39BQ9GZU3 492 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 UBE2ZQ9H832 354 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 PXMP2Q9NR77 195 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 HHLA2Q9UM44 414 aa9.5□□□□□ -0.89
PDLIM5-210ENST00000508216 ANTXRLA6NF34 631 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 LATO43561 262 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ACP5P13686 325 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 OR1E2P47887 323 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ATP5J2P56134 94 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 YPEL3P61236 119 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 GNB2P62879 340 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 NR0B2Q15466 257 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 PHYHD1Q5SRE7 291 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms