RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NUDT16L1Q9BRJ7 211 aaKnown RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 FAM192AQ9GZU8 254 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 IFT22Q9H7X7 185 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 SPACA1Q9HBV2 294 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 TCF7L1Q9HCS4 588 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 C1orf123Q9NWV4 160 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 PCDHB10Q9UN67 800 aa7.11□□□□□ -1.27
PDGFC-205ENST00000506880 SF3B6Q9Y3B4 125 aaKnown RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 NSD1Q96L73 2696 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-205ENST00000506880 ZANQ9Y493 2812 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 DSCAML1Q8TD84 2053 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 TRBV23-1A0A0A0MS06 115 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 A0A1W2PPH5 198 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 hCG_1807616A0A1W2PRN6 198 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 MAGEA13PA6NCF6 341 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 H0YL77 283 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 TNFRSF13BO14836 293 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-205ENST00000506880 AKR7A2O43488 359 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 CD5LO43866 347 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 NDUFS7O75251 213 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 KDM4BO94953 1096 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 GRPP07492 148 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 HCKP08631 526 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 SRMP19623 302 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 GLRA1P23415 457 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 THBS2P35442 1172 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 TGFBR2P37173 567 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 DVL1P1P54792 670 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-205ENST00000506880 IL13RA2Q14627 380 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 TMEM249Q2WGJ8 235 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 HSD17B12Q53GQ0 312 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 ESCO2Q56NI9 601 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 LIPKQ5VXJ0 399 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 CYB5R2Q6BCY4 276 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 C1orf122Q6ZSJ8 110 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 CALHM1Q8IU99 346 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 RDH10Q8IZV5 341 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 WFDC11Q8NEX6 87 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 OR51A4Q8NGJ6 313 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 OR51T1Q8NGJ9 327 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 LRRC29Q8WV35 223 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 RGP1Q92546 391 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-205ENST00000506880 MUL1Q969V5 352 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 SDSLQ96GA7 329 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 S100A13Q99584 98 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 GAL3ST1Q99999 423 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 MRPS26Q9BYN8 205 aaKnown RBP7.1□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF665Q9H7R5 613 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 TMEM165Q9HC07 324 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 DNAJB11Q9UBS4 358 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 FBLN5Q9UBX5 448 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 STUB1Q9UNE7 303 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 SSR3Q9UNL2 185 aa7.1□□□□□ -1.27
PDGFC-205ENST00000506880 SIRT4Q9Y6E7 314 aaPredicted RBP7.1□□□□□ -1.27
PDGFC-205ENST00000506880 IGKV1-9A0A0C4DH69 117 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CDIPTO14735 213 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 SIGLEC5O15389 551 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CDC14BO60729 498 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CA11O75493 328 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 SCGNO76038 276 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 NXPH2O95156 264 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 RBP4P02753 201 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CSN2P05814 226 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CHRM2P08172 466 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 WNT2P09544 360 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 HSMCR30P0CW71 290 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ANOS1P23352 680 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 MYL9P24844 172 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 LMO1P25800 156 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF93P35789 620 aaPredicted RBP7.09□□□□□ -1.27
PDGFC-205ENST00000506880 PMELP40967 661 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 PTGFRP43088 359 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ZP1P60852 638 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 FGF12P61328 243 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 LMO4P61968 165 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 IL13RA1P78552 427 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 DYNC1I2Q13409 638 aaKnown RBP7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ARL6IP1Q15041 203 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ZMYND11Q15326 602 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 MPPED2Q15777 294 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 MPV17LQ2QL34 196 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 LRRC10Q5BKY1 277 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CEP78Q5JTW2 689 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 C1orf100Q5SVJ3 147 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 STUMQ69YW2 141 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 XAF1Q6GPH4 301 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 HAGHLQ6PII5 290 aaPredicted RBP7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ACP7Q6ZNF0 438 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 WDR86Q86TI4 376 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 OR6M1Q8NGM8 313 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 OR13C9Q8NGT0 318 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CLDND2Q8NHS1 167 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 ANGPTL6Q8NI99 470 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 C8orf46Q8TAG6 207 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 GTF3AQ92664 365 aaKnown RBP7.09□□□□□ -1.27
PDGFC-205ENST00000506880 PPP1R14AQ96A00 147 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 PTX4Q96A99 478 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 KCTD12Q96CX2 325 aaKnown RBP7.09□□□□□ -1.27
PDGFC-205ENST00000506880 OR14A2Q96R54 314 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 CENPOQ9BU64 300 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms