RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CA14Q9ULX7 337 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 TP53TG5Q9Y2B4 290 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 H0YIG0 161 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 ADAM10O14672 748 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 OR5H8P0DN80 308 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF121P58317 390 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 ARL6IP1Q15041 203 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 SHHQ15465 462 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 TMEM196Q5HYL7 178 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 RTL6Q6ICC9 239 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 PACRGQ96M98 296 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 ST8SIA3O43173 380 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 HSPB1P04792 205 aaKnown RBP14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 DUSP1P28562 367 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 IL2RGP31785 369 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 DCAF7P61962 342 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 ICAM4Q14773 271 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 KISS1Q15726 138 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 SLC35E3Q7Z769 313 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 CYB561D1Q8N8Q1 229 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 OR5D18Q8NGL1 313 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 NIPSNAP3BQ9BS92 247 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 FOXD3Q9UJU5 478 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 LIPGQ9Y5X9 500 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 RFNGQ9Y644 331 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 PHOX2AO14813 284 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 CELA2BP08218 269 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 HNRNPA2B1P22626 353 aaKnown RBP14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 EWSR1Q01844 656 aaKnown RBP eCLIP14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 PLCXD2Q0VAA5 305 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 SLC22A25Q6T423 547 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 FBXW12Q6X9E4 464 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 OR2G3Q8NGZ4 309 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 MVB12AQ96EY5 273 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 BOD1Q96IK1 185 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 HIST1H2BLQ99880 126 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 SLC25A31Q9H0C2 315 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 ANXA10Q9UJ72 324 aa14.96□□□□□ -0.01
SQSTM1-211ENST00000506690 ADAMTS9Q9P2N4 1935 aa14.96□□□□□ -0.02
SQSTM1-211ENST00000506690 CDRT15L2A8MXV6 281 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 MSTNO14793 375 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 SCAF4O95104 1147 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 ATP6V0CP27449 155 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 CEBPGP53567 150 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 RAB4BP61018 213 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 EIF3IQ13347 325 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 DOK3Q7L591 496 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 SLC16A14Q7RTX9 510 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 C9orf40Q8IXQ3 194 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 RCC1LQ96I51 464 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 EMC6Q9BV81 110 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 SUCNR1Q9BXA5 334 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 C8orf33Q9H7E9 229 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 FAM86C1Q9NVL1 165 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 PISDQ9UG56 409 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 CSNK1A1P48729 337 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 FOXO1Q12778 655 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 DMRTC1Q5HYR2 192 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF506Q5JVG8 444 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 LIAT1Q6ZQX7 453 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 C6orf201Q7Z4U5 140 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 FBXL14Q8N1E6 418 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 ZFP62Q8NB50 900 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 RTN4IP1Q8WWV3 396 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 TSLPQ969D9 159 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 REEP6Q96HR9 211 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 FAM210BQ96KR6 192 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 PLA2G2FQ9BZM2 168 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 AK3Q9UIJ7 227 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 WSB1Q9Y6I7 421 aa14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 RANBP2P49792 3224 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-211ENST00000506690 A8MWP6 167 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 C9J4A7 227 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 COL9A1P20849 921 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 RGS19P49795 217 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 ASCL1P50553 236 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 BIDP55957 195 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 HHEXQ03014 270 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 TLE3Q04726 772 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF266Q14584 549 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 DPPA2Q7Z7J5 298 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 OR14K1Q8NGZ2 314 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 MSI2Q96DH6 328 aaKnown RBP14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 HDHD3Q9BSH5 251 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 MRPL13Q9BYD1 178 aaKnown RBP14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 C11orf1Q9H5F2 150 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 CHST11Q9NPF2 352 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 DCAF16Q9NXF7 216 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 A0A1W2PQF6 199 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 GIMD1P0DJR0 217 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 FZD2Q14332 565 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 AKR1C8PQ5T2L2 129 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 GABRG3Q99928 467 aa14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 COL5A1P20908 1838 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-211ENST00000506690 SMCO3A2RU48 225 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 B4DEV8 164 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 STMND1H3BQB6 276 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 TGOLN2O43493 480 aa14.93□□□□□ -0.02
SQSTM1-211ENST00000506690 ZNF728P0DKX0 622 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms