RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 NXPH2O95156 264 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 RPSAP08865 295 aaKnown RBP10.87□□□□□ -0.67
TCOF1-209ENST00000506630 PGA5P0DJD9 388 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 SELLP14151 372 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 MPZP25189 248 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 POU3F4P49335 361 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 ATP1B3P54709 279 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 PAX2Q02962 417 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 CCDC58Q4VC31 144 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 LRRC10Q5BKY1 277 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 CD276Q5ZPR3 534 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 XAF1Q6GPH4 301 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 RPL22L1Q6P5R6 122 aaKnown RBP10.87□□□□□ -0.67
TCOF1-209ENST00000506630 ACP7Q6ZNF0 438 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 OR52N1Q8NH53 320 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 ANGPTL6Q8NI99 470 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 NANPQ8TBE9 248 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 OPALINQ96PE5 141 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 GAFA1Q96PS6 74 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 PKIBQ9C010 78 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 DNTTIP1Q9H147 329 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 PLCXD1Q9NUJ7 323 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 RASL12Q9NYN1 266 aa10.87□□□□□ -0.67
TCOF1-209ENST00000506630 MEGF8Q7Z7M0 2845 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 SLC1A7O00341 560 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 FCN3O75636 299 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 INMTO95050 263 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 PSG2P11465 335 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 AMY2BP19961 511 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 EPHA1P21709 976 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 PRKACBP22694 351 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 C21orf33P30042 268 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-209ENST00000506630 SOX2P48431 317 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 HSPA13P48723 471 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 RBP2P50120 134 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 HILS1P60008 231 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 IL13RA1P78552 427 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 PAX8Q06710 450 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 IL24Q13007 206 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 ATPAF1Q5TC12 328 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-209ENST00000506630 ZNF788Q6ZQV5 615 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 LHFPL2Q6ZUX7 228 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 USP43Q70EL4 1123 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 SLC25A26Q70HW3 274 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 BTN2A1Q7KYR7 527 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 ZFP41Q8N8Y5 198 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 DNAAF1Q8NEP3 725 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 SLAMF9Q96A28 289 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 RFT1Q96AA3 541 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 DACT3Q96B18 629 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-209ENST00000506630 SPSB1Q96BD6 273 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 SMIM19Q96E16 107 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 ZCCHC4Q9H5U6 513 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 BABAM2Q9NXR7 383 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
TCOF1-209ENST00000506630 IGKV1D-17A0A075B6S4 117 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 KIR2DS1A0A191URI9 304 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 PNMA8CA0A1B0GUJ8 204 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 SIGLEC5O15389 551 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 LALBAP00709 142 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 HCKP08631 526 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 ACAA1P09110 424 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 NDUFB7P17568 137 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 MYF6P23409 242 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 CEBPDP49716 269 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 CAPZA1P52907 286 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 MTCP1P56278 107 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 FGF12P61328 243 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 RIPK1Q13546 671 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 C6orf141Q5SZD1 244 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 PNLDC1Q8NA58 520 aaKnown RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 TMEM185AQ8NFB2 350 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 GPR148Q8TDV2 347 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 H1FXQ92522 213 aaKnown RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 RGP1Q92546 391 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 MED30Q96HR3 178 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 CEP19Q96LK0 163 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 SPACA5Q96QH8 159 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 NRIP2Q9BQI9 281 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 ANKRD60Q9BZ19 345 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 NEK6Q9HC98 313 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 FKBP14Q9NWM8 211 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 SCN3BQ9NY72 215 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 OR14J1Q9UGF5 321 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
TCOF1-209ENST00000506630 SIRT4Q9Y6E7 314 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-209ENST00000506630 IGHV3OR16-10A0A075B7F0 116 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 TRAV40A0A0B4J280 105 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 RFPL4AA6NLU0 287 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 PTGES3LE9PB15 166 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 RFPL4AL1F8VTS6 287 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 SULT1B1O43704 296 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 NOS1APO75052 506 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-209ENST00000506630 ECDO95905 644 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-209ENST00000506630 CYB5AP00167 134 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 FSHBP01225 129 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 CDK1P06493 297 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms