RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 OR2J1Q9GZK6 312 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 GPR137BO60478 399 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 EIF2S3P41091 472 aaKnown RBP12.34□□□□□ -0.43
TCOF1-207ENST00000504761 PNLIPRP3Q17RR3 467 aa12.34□□□□□ -0.43
TCOF1-207ENST00000504761 B8ZZF3 427 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 CTXN2P0C2S0 81 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 SLC6A1P30531 599 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF92Q03936 586 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 ZNF528Q3MIS6 628 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 CD200R1LQ6Q8B3 271 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 PPP1R1CQ8WVI7 109 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 DYRK2Q92630 601 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 RAB39BQ96DA2 213 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 WDR13Q9H1Z4 485 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 OPA3Q9H6K4 179 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 PPP1R3EQ9H7J1 279 aa12.33□□□□□ -0.43
TCOF1-207ENST00000504761 TBPP20226 339 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 PIGYQ3MUY2 71 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 MUC20Q8N307 709 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-207ENST00000504761 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 ARL11Q969Q4 196 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 MLXQ9UH92 298 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 TECTAO75443 2155 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.44
TCOF1-207ENST00000504761 F8W036 122 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 LRP3O75074 770 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 PDCD6O75340 191 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 MED6O75586 246 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 BLOC1S1P78537 153 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 LYG2Q86SG7 212 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 ARRDC1Q8N5I2 433 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-207ENST00000504761 MARVELD1Q9BSK0 173 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 LYPD3O95274 346 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 IFNA10P01566 189 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 C17orf78Q8N4C9 275 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 SLC25A40Q8TBP6 338 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 CCL17Q92583 94 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 GMPPAQ96IJ6 420 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-207ENST00000504761 ZNF488Q96MN9 340 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
TCOF1-207ENST00000504761 PCDHGA9Q9Y5G4 932 aaKnown RBP12.33□□□□□ -0.44
TCOF1-207ENST00000504761 DEFB108AA8MXU0 73 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 SNCAP37840 140 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 DHRS2Q13268 280 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 PPP1R1AQ13522 171 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 GLDNQ6ZMI3 551 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-207ENST00000504761 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 FAM214BQ7L5A3 538 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 BHLHA15Q7RTS1 189 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-207ENST00000504761 OR10V1Q8NGI7 309 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 OPN3Q9H1Y3 402 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-207ENST00000504761 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 CADP27708 2225 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 A0A087WV48 116 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 ST8SIA3O43173 380 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 RAB6AP20340 208 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 PSMB6P28072 239 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 CALCRP30988 508 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 ECI1P42126 302 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-207ENST00000504761 SRPXP78539 464 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 OR8G2PQ6IF36 304 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 NUFIP2Q7Z417 695 aaKnown RBP12.32□□□□□ -0.44
TCOF1-207ENST00000504761 TECTBQ96PL2 329 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 NARFLQ9H6Q4 476 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 A0A1W2PNV4 684 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 SNRPGP15A8MWD9 76 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 NGFP01138 241 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 ADRA2CP18825 462 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 FAM185AQ8N0U4 392 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 CHST5Q9GZS9 411 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 GLRX2Q9NS18 164 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 EDARQ9UNE0 448 aa12.32□□□□□ -0.44
TCOF1-207ENST00000504761 ANKRD33BA6NCL7 494 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 INHBBP09529 407 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 TMEM128Q5BJH2 165 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 TMEM108Q6UXF1 575 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 TIMP4Q99727 224 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 SULT4A1Q9BR01 284 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-207ENST00000504761 HELZP42694 1942 aaKnown RBP12.31□□□□□ -0.44
TCOF1-207ENST00000504761 NHLRC1Q6VVB1 395 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 LRRC29Q8WV35 223 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 ARPC5LQ9BPX5 153 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 HDHD3Q9BSH5 251 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-207ENST00000504761 ERRFI1Q9UJM3 462 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-207ENST00000504761 LIMK1P53667 647 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 SSBP1Q04837 148 aaKnown RBP12.31□□□□□ -0.44
TCOF1-207ENST00000504761 FNDC7Q5VTL7 733 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 OR4A16Q8NH70 328 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms