RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SLC25A26Q70HW3 274 aa8.81□□□□□ -1
TPM3-217ENST00000504663 SAXO1Q8IYX7 474 aa8.81□□□□□ -1
TPM3-217ENST00000504663 CLEC18CQ8NCF0 446 aa8.81□□□□□ -1
TPM3-217ENST00000504663 KCNG3Q8TAE7 436 aa8.81□□□□□ -1
TPM3-217ENST00000504663 SMIM4Q8WVI0 70 aa8.81□□□□□ -1
TPM3-217ENST00000504663 SLAMF9Q96A28 289 aa8.81□□□□□ -1
TPM3-217ENST00000504663 RADILQ96JH8 1075 aa8.81□□□□□ -1
TPM3-217ENST00000504663 RNF170Q96K19 258 aa8.81□□□□□ -1
TPM3-217ENST00000504663 RHOVQ96L33 236 aa8.81□□□□□ -1
TPM3-217ENST00000504663 ZNF488Q96MN9 340 aa8.81□□□□□ -1
TPM3-217ENST00000504663 RTL8AQ9BWD3 113 aa8.81□□□□□ -1
TPM3-217ENST00000504663 TMEM59Q9BXS4 323 aa8.81□□□□□ -1
TPM3-217ENST00000504663 ESRP2Q9H6T0 727 aaKnown RBP8.81□□□□□ -1
TPM3-217ENST00000504663 TMEM100Q9NV29 134 aa8.81□□□□□ -1
TPM3-217ENST00000504663 ROS1P08922 2347 aa8.81□□□□□ -1
TPM3-217ENST00000504663 MYO18BQ8IUG5 2567 aa8.8□□□□□ -1
TPM3-217ENST00000504663 A0A0A6YYH2 397 aa8.8□□□□□ -1
TPM3-217ENST00000504663 A0A1W2PQ09 198 aa8.8□□□□□ -1
TPM3-217ENST00000504663 TUBAL3A6NHL2 446 aa8.8□□□□□ -1
TPM3-217ENST00000504663 A6NJ64 397 aa8.8□□□□□ -1
TPM3-217ENST00000504663 TMEM210A6NLX4 147 aa8.8□□□□□ -1
TPM3-217ENST00000504663 PLA2G10O15496 165 aa8.8□□□□□ -1
TPM3-217ENST00000504663 SSX4O60224 188 aa8.8□□□□□ -1
TPM3-217ENST00000504663 SSX5O60225 188 aa8.8□□□□□ -1
TPM3-217ENST00000504663 IGHV1-46P01743 117 aa8.8□□□□□ -1
TPM3-217ENST00000504663 TMEM225BP0DP42 221 aa8.8□□□□□ -1
TPM3-217ENST00000504663 SERPINA2P20848 420 aa8.8□□□□□ -1
TPM3-217ENST00000504663 PMELP40967 661 aa8.8□□□□□ -1
TPM3-217ENST00000504663 ZNF181Q2M3W8 571 aa8.8□□□□□ -1
TPM3-217ENST00000504663 PIGYQ3MUY2 71 aa8.8□□□□□ -1
TPM3-217ENST00000504663 NHLRC3Q5JS37 347 aa8.8□□□□□ -1
TPM3-217ENST00000504663 TMEM69Q5SWH9 247 aa8.8□□□□□ -1
TPM3-217ENST00000504663 PRAMEF6Q5VXH4 476 aa8.8□□□□□ -1
TPM3-217ENST00000504663 HAGHLQ6PII5 290 aaPredicted RBP8.8□□□□□ -1
TPM3-217ENST00000504663 Q6ZPA2 131 aa8.8□□□□□ -1
TPM3-217ENST00000504663 PNLDC1Q8NA58 520 aaKnown RBP8.8□□□□□ -1
TPM3-217ENST00000504663 SCCPDHQ8NBX0 429 aa8.8□□□□□ -1
TPM3-217ENST00000504663 OR51T1Q8NGJ9 327 aa8.8□□□□□ -1
TPM3-217ENST00000504663 CPNE2Q96FN4 548 aaPredicted RBP8.8□□□□□ -1
TPM3-217ENST00000504663 S100A16Q96FQ6 103 aaKnown RBP8.8□□□□□ -1
TPM3-217ENST00000504663 GAL3ST1Q99999 423 aa8.8□□□□□ -1
TPM3-217ENST00000504663 MICU1Q9BPX6 476 aa8.8□□□□□ -1
TPM3-217ENST00000504663 NRIP2Q9BQI9 281 aa8.8□□□□□ -1
TPM3-217ENST00000504663 ATG5Q9H1Y0 275 aa8.8□□□□□ -1
TPM3-217ENST00000504663 CXXC4Q9H2H0 198 aa8.8□□□□□ -1
TPM3-217ENST00000504663 HES4Q9HCC6 221 aa8.8□□□□□ -1
TPM3-217ENST00000504663 RBFOX1Q9NWB1 397 aaKnown RBP8.8□□□□□ -1
TPM3-217ENST00000504663 TAAR3PQ9P1P4 343 aa8.8□□□□□ -1
TPM3-217ENST00000504663 NDRG3Q9UGV2 375 aa8.8□□□□□ -1
TPM3-217ENST00000504663 ANAPC10Q9UM13 185 aa8.8□□□□□ -1
TPM3-217ENST00000504663 ING4Q9UNL4 249 aa8.8□□□□□ -1
TPM3-217ENST00000504663 NOP16Q9Y3C1 178 aaKnown RBP8.8□□□□□ -1
TPM3-217ENST00000504663 SPEF1Q9Y4P9 236 aa8.8□□□□□ -1
TPM3-217ENST00000504663 CACNA1DQ01668 2161 aa8.8□□□□□ -1
TPM3-217ENST00000504663 PKDREJQ9NTG1 2253 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.79□□□□□ -1
TPM3-217ENST00000504663 AKR7A2O43488 359 aa8.79□□□□□ -1
TPM3-217ENST00000504663 NOS1APO75052 506 aaPredicted RBP8.79□□□□□ -1
TPM3-217ENST00000504663 CRTAPO75718 401 aaPredicted RBP8.79□□□□□ -1
TPM3-217ENST00000504663 CD3EP07766 207 aa8.79□□□□□ -1
TPM3-217ENST00000504663 MELTFP08582 738 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ACAA1P09110 424 aaPredicted RBP8.79□□□□□ -1
TPM3-217ENST00000504663 OR4A8P0C604 315 aa8.79□□□□□ -1
TPM3-217ENST00000504663 PGA5P0DJD9 388 aa8.79□□□□□ -1
TPM3-217ENST00000504663 VEGFCP49767 419 aa8.79□□□□□ -1
TPM3-217ENST00000504663 RBM11P57052 281 aaKnown RBP8.79□□□□□ -1
TPM3-217ENST00000504663 OR8G1Q15617 311 aa8.79□□□□□ -1
TPM3-217ENST00000504663 EFNB3Q15768 340 aa8.79□□□□□ -1
TPM3-217ENST00000504663 MPPED2Q15777 294 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ZNF672Q499Z4 452 aaPredicted RBP8.79□□□□□ -1
TPM3-217ENST00000504663 PYDC2Q56P42 97 aa8.79□□□□□ -1
TPM3-217ENST00000504663 OLFML2AQ68BL7 652 aa8.79□□□□□ -1
TPM3-217ENST00000504663 SLC22A25Q6T423 547 aa8.79□□□□□ -1
TPM3-217ENST00000504663 WDR82Q6UXN9 313 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ZNF826PQ6ZT77 177 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ZNF573Q86YE8 665 aa8.79□□□□□ -1
TPM3-217ENST00000504663 BATF2Q8N1L9 274 aa8.79□□□□□ -1
TPM3-217ENST00000504663 Q8N402 240 aa8.79□□□□□ -1
TPM3-217ENST00000504663 OR10R2Q8NGX6 335 aa8.79□□□□□ -1
TPM3-217ENST00000504663 OR13G1Q8NGZ3 307 aa8.79□□□□□ -1
TPM3-217ENST00000504663 OR51F2Q8NH61 342 aa8.79□□□□□ -1
TPM3-217ENST00000504663 OR52I2Q8NH67 350 aa8.79□□□□□ -1
TPM3-217ENST00000504663 GPX8Q8TED1 209 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ST8SIA4Q92187 359 aa8.79□□□□□ -1
TPM3-217ENST00000504663 MEGF10Q96KG7 1140 aa8.79□□□□□ -1
TPM3-217ENST00000504663 SLC22A4Q9H015 551 aa8.79□□□□□ -1
TPM3-217ENST00000504663 CST11Q9H112 138 aa8.79□□□□□ -1
TPM3-217ENST00000504663 METTL9Q9H1A3 318 aa8.79□□□□□ -1
TPM3-217ENST00000504663 NEK6Q9HC98 313 aa8.79□□□□□ -1
TPM3-217ENST00000504663 NGBQ9NPG2 151 aa8.79□□□□□ -1
TPM3-217ENST00000504663 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.79□□□□□ -1
TPM3-217ENST00000504663 ABCB10Q9NRK6 738 aa8.79□□□□□ -1
TPM3-217ENST00000504663 RCC2Q9P258 522 aaKnown RBP8.79□□□□□ -1
TPM3-217ENST00000504663 RABL2AQ9UBK7 228 aaPredicted RBP8.79□□□□□ -1
TPM3-217ENST00000504663 DUSP13Q9UII6 198 aa8.79□□□□□ -1
TPM3-217ENST00000504663 RABL2BQ9UNT1 228 aa8.79□□□□□ -1
TPM3-217ENST00000504663 RNF115Q9Y4L5 304 aa8.79□□□□□ -1
TPM3-217ENST00000504663 ATP23Q9Y6H3 246 aa8.79□□□□□ -1
TPM3-217ENST00000504663 TRAV18A0A075B6X5 111 aa8.78□□□□□ -1
TPM3-217ENST00000504663 IGHV3-64DA0A0J9YX35 117 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms