RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SLC25A26Q70HW3 274 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 CALHM1Q8IU99 346 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 GCSAMQ8N6F7 178 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 NKAIN3Q8N8D7 197 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 OR52N4Q8NGI2 321 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 OR5D18Q8NGL1 313 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 AQP3Q92482 292 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 GPER1Q99527 375 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 PPIL3Q9H2H8 161 aaKnown RBP8.42□□□□□ -1.06
NUP54-203ENST00000504173 METTL17Q9H7H0 456 aaPredicted RBP8.42□□□□□ -1.06
NUP54-203ENST00000504173 SSR3Q9UNL2 185 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 WIPI2Q9Y4P8 454 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 PPIAL4AQ9Y536 164 aa8.42□□□□□ -1.06
NUP54-203ENST00000504173 MEGF11A6BM72 1044 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 VWC2LB2RUY7 222 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 SRRM5B3KS81 715 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 AKR7A2O43488 359 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 EGR1P18146 543 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 SRMP19623 302 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 GLRA1P23415 457 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 GADD45AP24522 165 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 MYL9P24844 172 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 MPZP25189 248 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 ZNF93P35789 620 aaPredicted RBP8.41□□□□□ -1.06
NUP54-203ENST00000504173 CFHR2P36980 270 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 HOXA4Q00056 320 aaPredicted RBP8.41□□□□□ -1.06
NUP54-203ENST00000504173 IL24Q13007 206 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 PDZK1IP1Q13113 114 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 TIMM50Q3ZCQ8 353 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 SFRP4Q6FHJ7 346 aaPredicted RBP8.41□□□□□ -1.06
NUP54-203ENST00000504173 C22orf42Q6IC83 251 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 RNF144BQ7Z419 303 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 MKXQ8IYA7 352 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 JAGN1Q8N5M9 183 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 PNLDC1Q8NA58 520 aaKnown RBP8.41□□□□□ -1.06
NUP54-203ENST00000504173 POC1AQ8NBT0 407 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 TNFAIP8L1Q8WVP5 186 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 CHCHD6Q9BRQ6 235 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 REG4Q9BYZ8 158 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 FAM192AQ9GZU8 254 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 OR51E2Q9H255 320 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 NARFLQ9H6Q4 476 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 SNTG1Q9NSN8 517 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 SCOCQ9UIL1 159 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 GSTK1Q9Y2Q3 226 aa8.41□□□□□ -1.06
NUP54-203ENST00000504173 KMT2CQ8NEZ4 4911 aaKnown RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 TRAV38-1A0A0B4J264 116 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 LOC100506127A0A0U1RQW1 187 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 OOEPA6NGQ2 149 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 RNF223E7ERA6 249 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 TRAPPC2LH3BP13 241 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 LGALS8O00214 317 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 WNT9BO14905 357 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 ANGPTL7O43827 346 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 CD5LO43866 347 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 NXPH2O95156 264 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 LHBP01229 141 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 IGHV2-70P01814 119 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 PGA5P0DJD9 388 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 TMEM225BP0DP42 221 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 MDH2P40926 338 aaKnown RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 OR3A4PP47883 348 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 ZP1P60852 638 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 ZMYND11Q15326 602 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 KCNJ8Q15842 424 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 GPR141Q7Z602 305 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 LRRTM1Q86UE6 522 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 BATF2Q8N1L9 274 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 MUC20Q8N307 709 aaPredicted RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 SPICQ8N5J4 248 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 ZSCAN4Q8NAM6 433 aaPredicted RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 C19orf18Q8NEA5 215 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 DEFB108BQ8NET1 73 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 OR13F1Q8NGS4 319 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 OR51F2Q8NH61 342 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 SLAMF9Q96A28 289 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 TMIGD2Q96BF3 282 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 YIPF6Q96EC8 236 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 CEP19Q96LK0 163 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 ZNF488Q96MN9 340 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 NKX3-1Q99801 234 aaPredicted RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 GAL3ST1Q99999 423 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 WDR13Q9H1Z4 485 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 ELL3Q9HB65 397 aaPredicted RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 SMURF1Q9HCE7 757 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 TXNL4BQ9NX01 149 aaKnown RBP8.4□□□□□ -1.06
NUP54-203ENST00000504173 DNAJB11Q9UBS4 358 aa8.4□□□□□ -1.06
NUP54-203ENST00000504173 IGHV4-61A0A0C4DH41 118 aa8.39□□□□□ -1.07
NUP54-203ENST00000504173 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.39□□□□□ -1.07
NUP54-203ENST00000504173 PDCD5O14737 125 aa8.39□□□□□ -1.07
NUP54-203ENST00000504173 AIREO43918 545 aa8.39□□□□□ -1.07
NUP54-203ENST00000504173 NOS1APO75052 506 aaPredicted RBP8.39□□□□□ -1.07
NUP54-203ENST00000504173 FSTL3O95633 263 aa8.39□□□□□ -1.07
NUP54-203ENST00000504173 TFAP2AP05549 437 aa8.39□□□□□ -1.07
NUP54-203ENST00000504173 ACAA1P09110 424 aaPredicted RBP8.39□□□□□ -1.07
NUP54-203ENST00000504173 MUC1P15941 1255 aaPredicted RBP8.39□□□□□ -1.07
NUP54-203ENST00000504173 ADRA2CP18825 462 aa8.39□□□□□ -1.07
NUP54-203ENST00000504173 BCL3P20749 454 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms