RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 COL10A1Q03692 680 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 ZNF684Q5T5D7 378 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
TRAF4-212ENST00000498540 ZNF573Q86YE8 665 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 BBS1Q8NFJ9 593 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 TEAD3Q99594 435 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 PBOV1Q9GZY1 135 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 ENPP5Q9UJA9 477 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
TRAF4-212ENST00000498540 PQLC2LA1A4F0 135 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 PRR32B1ATL7 298 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 GSC2O15499 205 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 ZNF737O75373 536 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 ACTA2P62736 377 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 ACTG2P63267 376 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 ACTC1P68032 377 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 ACTA1P68133 377 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-212ENST00000498540 KHDC1LQ5JSQ8 128 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 MINOS1Q5TGZ0 78 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 CD300LDQ6UXZ3 194 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 LINC00482Q8N8I6 264 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 OR10G2Q8NGC3 310 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 NDNFQ8TB73 568 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 REEP1Q9H902 201 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 GPR173Q9NS66 373 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 SLC22A13Q9Y226 551 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 POLDIP2Q9Y2S7 368 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 MINOS1-NBL1R4GNA1 71 aa11.74□□□□□ -0.53
TRAF4-212ENST00000498540 IGHV2-26A0A0B4J1V2 119 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 TCRBV5S2A0A599 114 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 ACOD1A6NK06 481 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 E9PQ18 207 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 PRODHO43272 600 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 DHRS3O75911 302 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 LPLP06858 475 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 CD24P25063 80 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 MPZP25189 248 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 TMEM42Q69YG0 159 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 OR2T5Q6IEZ7 315 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 ASRGL1Q7L266 308 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 GDPD3Q7L5L3 318 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 CPOQ8IVL8 374 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 OR4X2Q8NGF9 303 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 OR2T29Q8NH02 315 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 ITFG2Q969R8 447 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 FEVQ99581 238 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 ELAC2Q9BQ52 826 aaKnown RBP11.73□□□□□ -0.53
TRAF4-212ENST00000498540 TTTY10Q9BZA0 68 aa11.73□□□□□ -0.53
TRAF4-212ENST00000498540 SH2D7A6NKC9 451 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-212ENST00000498540 F8VVB4 439 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 F8VWA3 439 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 CLIC3O95833 236 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 TTRP02766 147 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 SLC2A5P22732 501 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 RPS7P62081 194 aaKnown RBP11.72□□□□□ -0.53
TRAF4-212ENST00000498540 EDDM3AQ14507 147 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 GINS1Q14691 196 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 ABCA11PQ4W5N1 156 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 CLVS2Q5SYC1 327 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 ETV3LQ6ZN32 361 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 DEFB107AQ8IZN7 70 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 OR8H2Q8N162 312 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 ZNF676Q8N7Q3 588 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 ACTR3BQ9P1U1 418 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 NUFIP1Q9UHK0 495 aaKnown RBP11.72□□□□□ -0.53
TRAF4-212ENST00000498540 SESN1Q9Y6P5 492 aa11.72□□□□□ -0.53
TRAF4-212ENST00000498540 TMEM82A0PJX8 343 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 A6NIN4 97 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 MRPL3P09001 348 aaKnown RBP11.71□□□□□ -0.53
TRAF4-212ENST00000498540 CCDC159P0C7I6 412 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 ESRRGP62508 458 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 SLC35D3Q5M8T2 416 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 LCN1P1Q5VSP4 162 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 KCTD18Q6PI47 426 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-212ENST00000498540 DEGS2Q6QHC5 323 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 C16orf82Q7Z2V1 217 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 MRPL41Q8IXM3 137 aaKnown RBP11.71□□□□□ -0.53
TRAF4-212ENST00000498540 OR4P4Q8NGL7 312 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 BCAS4Q8TDM0 211 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 DPF1Q92782 380 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 SLC25A33Q9BSK2 321 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 MROQ9BYG7 248 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 YIPF3Q9GZM5 350 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 MAGIXQ9H6Y5 334 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 LIN7BQ9HAP6 207 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 COPS3Q9UNS2 423 aa11.71□□□□□ -0.53
TRAF4-212ENST00000498540 DLGAP1O14490 977 aa11.7□□□□□ -0.54
TRAF4-212ENST00000498540 SRSF10O75494 262 aaKnown RBP11.7□□□□□ -0.54
TRAF4-212ENST00000498540 MMP23AO75900 390 aa11.7□□□□□ -0.54
TRAF4-212ENST00000498540 DNAJC8O75937 253 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-212ENST00000498540 AMY1AP04745 511 aa11.7□□□□□ -0.54
TRAF4-212ENST00000498540 AMY2AP04746 511 aa11.7□□□□□ -0.54
TRAF4-212ENST00000498540 CHRM2P08172 466 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms