RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 KIR3DL2P43630 455 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 IER3P46695 156 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 UBE2E1P51965 193 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 RAG2P55895 527 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 TP53I3Q53FA7 332 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 FDX2Q6P4F2 183 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 CALHM1Q8IU99 346 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 FAM185AQ8N0U4 392 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 ACBD7Q8N6N7 88 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 OR2G2Q8NGZ5 317 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 TRMT10AQ8TBZ6 339 aaKnown RBP12.89□□□□□ -0.35
HDAC4-213ENST00000496347 ZNF488Q96MN9 340 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 MBOAT4Q96T53 435 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 FAM234AQ9H0X4 552 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 ZNRD1Q9P1U0 126 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 GMPPBQ9Y5P6 360 aa12.89□□□□□ -0.35
HDAC4-213ENST00000496347 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 FAM230AA0A1W2PPH8 454 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 BTBD17A6NE02 478 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 PAHP00439 452 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 IGHV4-59P01825 116 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 ISG15P05161 165 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 MDKP21741 143 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-213ENST00000496347 PRDX2P32119 198 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 SAA4P35542 130 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 FUT6P51993 359 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
HDAC4-213ENST00000496347 UBE2V2Q15819 145 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-213ENST00000496347 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 TMEM244Q5VVB8 128 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 Q8IYB0 196 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 PQLC1Q8N2U9 271 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 DNAAF1Q8NEP3 725 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 UBE2FQ969M7 185 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-213ENST00000496347 CEP19Q96LK0 163 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 C19orf12Q9NSK7 152 aa12.88□□□□□ -0.35
HDAC4-213ENST00000496347 H0YAE9 185 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 GPR137BO60478 399 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 GABRB1P18505 474 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 CCR9P51686 369 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 ZNF91Q05481 1191 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 KLRD1Q13241 179 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 MIDNQ504T8 468 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 GDPGP1Q6ZNW5 385 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 EGFL6Q8IUX8 553 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 WFDC12Q8WWY7 111 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 SPSB1Q96BD6 273 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 Q96MT0 163 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 INPP5EQ9NRR6 644 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 TNFRSF19Q9NS68 423 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 C1RLQ9NZP8 487 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 VPREB3Q9UKI3 123 aa12.87□□□□□ -0.35
HDAC4-213ENST00000496347 IGKV1-27A0A075B6S5 117 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 hCG_1809904A0A1W2PP81 198 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 A0A1W2PPE2 198 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 A0A1W2PR64 198 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 A0A1W2PRV1 198 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 MEIOCA2RUB1 952 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 H3BSH0 61 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 RPSAP08865 295 aaKnown RBP12.86□□□□□ -0.35
HDAC4-213ENST00000496347 DBTP11182 482 aaKnown RBP12.86□□□□□ -0.35
HDAC4-213ENST00000496347 ZNF20P17024 532 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 CEBPDP49716 269 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-213ENST00000496347 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 ENTHD1Q8IYW4 607 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 SYS1Q8N2H4 156 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 OR5R1Q8NH85 324 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 ZNF696Q9H7X3 374 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 FRRS1LQ9P0K9 344 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 OR14J1Q9UGF5 321 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 HHLA2Q9UM44 414 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
HDAC4-213ENST00000496347 SF3B6Q9Y3B4 125 aaKnown RBP12.86□□□□□ -0.35
HDAC4-213ENST00000496347 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
HDAC4-213ENST00000496347 VWFP04275 2813 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 K7N7A8 449 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 SPRY1O43609 319 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-213ENST00000496347 ANGPTL7O43827 346 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
HDAC4-213ENST00000496347 IGHA1P01876 353 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 TK1P04183 234 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 HTR1AP08908 422 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 PRKACBP22694 351 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 OMGP23515 440 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 RBP2P50120 134 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 DLX1P56177 255 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 OR12D2P58182 307 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms