RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 UPF3BQ9BZI7 483 aaKnown RBP2.33□□□□□ -2.04
CLTC-208ENST00000496076 EXOSC4Q9NPD3 245 aaKnown RBP2.33□□□□□ -2.04
CLTC-208ENST00000496076 NLE1Q9NVX2 485 aaPredicted RBP2.33□□□□□ -2.04
CLTC-208ENST00000496076 C21orf62Q9NYP8 219 aa2.33□□□□□ -2.04
CLTC-208ENST00000496076 TAS2R5Q9NYW4 299 aa2.33□□□□□ -2.04
CLTC-208ENST00000496076 STX18Q9P2W9 335 aaKnown RBP2.33□□□□□ -2.04
CLTC-208ENST00000496076 A0A0G2JMP0 313 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 A0A0X1KG70 313 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 GOLGA8IPA6NC78 632 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 TCAPO15273 167 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 YEATS4O95619 227 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 IGKV5-2P06315 115 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 GP1BAP07359 652 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 MRPL3P09001 348 aaKnown RBP2.32□□□□□ -2.04
CLTC-208ENST00000496076 TAC1P20366 129 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 PRSS3P35030 304 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 ERFP50548 548 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 RAB38P57729 211 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 SKP1P63208 163 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 PITPNAQ00169 270 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 FLOT2Q14254 428 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 BSXQ3C1V8 233 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 IDNKQ5T6J7 187 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 UGT2A3Q6UWM9 527 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 PRNTQ86SH4 94 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 PDPNQ86YL7 162 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 OR51Q1Q8NH59 317 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 BLNKQ8WV28 456 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 FRZBQ92765 325 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 SLC25A46Q96AG3 418 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 SMARCD1Q96GM5 515 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 QKIQ96PU8 341 aaKnown RBP eCLIP2.32□□□□□ -2.042e-6■□□□□ 9.4
CLTC-208ENST00000496076 SHCBP1LQ9BZQ2 653 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 WDR55Q9H6Y2 383 aaPredicted RBP2.32□□□□□ -2.04
CLTC-208ENST00000496076 ABCB9Q9NP78 766 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 CA10Q9NS85 328 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 DNAJC27Q9NZQ0 273 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 SCML1Q9UN30 329 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 SNX24Q9Y343 169 aa2.32□□□□□ -2.04
CLTC-208ENST00000496076 ADAMTSL3P82987 1691 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 RBFOX3A6NFN3 312 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 PLPP3O14495 311 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 TOR1AO14656 332 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 SNAP29O95721 258 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 CCNE2O96020 404 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 CYB5R3P00387 301 aaPredicted RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 CD28P10747 220 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 HLA-GP17693 338 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 IL1RNP18510 177 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 M6PRP20645 277 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 TEAD1P28347 426 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 HTR2BP41595 481 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 TAS2R43P59537 309 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 TPM4P67936 248 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 CDC20Q12834 499 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 RAB31Q13636 194 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 SYCP1Q15431 976 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 OR4D1Q15615 310 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 TOMM34Q15785 309 aaPredicted RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 OR10J3Q5JRS4 329 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 Q5W150 140 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 ITPRIPQ8IWB1 547 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 CYP4Z2PQ8N1L4 340 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 OR2M7Q8NG81 312 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 ZNF420Q8TAQ5 688 aaPredicted RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 NELFBQ8WX92 580 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 CCDC127Q96BQ5 260 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 MRPL48Q96GC5 212 aaKnown RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 FMC1Q96HJ9 113 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 RILPQ96NA2 401 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 GPR82Q96P67 336 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 SPACA5Q96QH8 159 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 RNF5Q99942 180 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 LLPHQ9BRT6 129 aaKnown RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 TBL1XR1Q9BZK7 514 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 NXF2Q9GZY0 626 aaKnown RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 SDHAF3Q9NRP4 125 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 TAS2R13Q9NYV9 303 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 NPHP4O75161 1426 aaPredicted RBP2.31□□□□□ -2.04
CLTC-208ENST00000496076 TSPOAP1O95153 1857 aa2.31□□□□□ -2.04
CLTC-208ENST00000496076 CENPBD1B2RD01 187 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 CDIPTO14735 213 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 CALUO43852 315 aaPredicted RBP2.3□□□□□ -2.04
CLTC-208ENST00000496076 SCO1O75880 301 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 MYO1DO94832 1006 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 TPM3P06753 285 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 KDELR2P33947 212 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 RPA3P35244 121 aaPredicted RBP2.3□□□□□ -2.04
CLTC-208ENST00000496076 TGFBR1P36897 503 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 SLAMF1Q13291 335 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 MAPRE2Q15555 327 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 CEACAM16Q2WEN9 425 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 FBXL19-AS1Q494R0 122 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 KLHL12Q53G59 568 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 FAM71E1Q6IPT2 247 aa2.3□□□□□ -2.04
CLTC-208ENST00000496076 USP50Q70EL3 339 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms